Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 AC007322.1-201ENST00000426983 750 ntBASIC15.68■□□□□ 0.1
SCAF4O95104 CDCA4P2-201ENST00000441182 718 ntBASIC15.68■□□□□ 0.1
SCAF4O95104 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.68■□□□□ 0.1
SCAF4O95104 DUX4L16-201ENST00000555130 1264 ntBASIC15.68■□□□□ 0.1
SCAF4O95104 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SCAF4O95104 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCAF4O95104 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SCAF4O95104 PHGDH-210ENST00000641115 1638 ntBASIC15.68■□□□□ 0.1
SCAF4O95104 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SCAF4O95104 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SCAF4O95104 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.67■□□□□ 0.1
SCAF4O95104 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.67■□□□□ 0.1
SCAF4O95104 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.67■□□□□ 0.1
SCAF4O95104 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 AC026185.1-201ENST00000445748 174 ntBASIC15.67■□□□□ 0.1
SCAF4O95104 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.67■□□□□ 0.1
SCAF4O95104 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.67■□□□□ 0.1
SCAF4O95104 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.67■□□□□ 0.1
SCAF4O95104 AC231657.2-201ENST00000624556 255 ntBASIC15.67■□□□□ 0.1
SCAF4O95104 AC013268.1-206ENST00000638368 961 ntBASIC15.67■□□□□ 0.1
SCAF4O95104 AC112229.1-201ENST00000639295 961 ntBASIC15.67■□□□□ 0.1
SCAF4O95104 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.67■□□□□ 0.1
SCAF4O95104 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SCAF4O95104 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SCAF4O95104 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.67■□□□□ 0.1
SCAF4O95104 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
SCAF4O95104 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SCAF4O95104 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SCAF4O95104 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCAF4O95104 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SCAF4O95104 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
SCAF4O95104 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SCAF4O95104 CYP21A1P-202ENST00000354927 1481 ntBASIC15.66■□□□□ 0.1
SCAF4O95104 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.66■□□□□ 0.1
SCAF4O95104 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.66■□□□□ 0.1
SCAF4O95104 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.66■□□□□ 0.1
SCAF4O95104 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SCAF4O95104 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.66■□□□□ 0.1
SCAF4O95104 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SCAF4O95104 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SCAF4O95104 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SCAF4O95104 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.66■□□□□ 0.1
SCAF4O95104 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.66■□□□□ 0.1
SCAF4O95104 AL162412.1-201ENST00000567129 965 ntBASIC15.66■□□□□ 0.1
SCAF4O95104 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SCAF4O95104 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.66■□□□□ 0.1
SCAF4O95104 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.66■□□□□ 0.1
SCAF4O95104 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SCAF4O95104 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAF4O95104 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCAF4O95104 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCAF4O95104 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCAF4O95104 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SCAF4O95104 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCAF4O95104 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SCAF4O95104 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.65■□□□□ 0.1
SCAF4O95104 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SCAF4O95104 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SCAF4O95104 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCAF4O95104 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.65■□□□□ 0.1
SCAF4O95104 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.65■□□□□ 0.1
SCAF4O95104 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCAF4O95104 AC006970.2-201ENST00000450065 779 ntBASIC15.65■□□□□ 0.1
SCAF4O95104 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCAF4O95104 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms