Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 AC004951.3-201ENST00000418645 1148 ntBASIC17.7■□□□□ 0.42
NKX2-2O95096 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX2-2O95096 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX2-2O95096 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX2-2O95096 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NKX2-2O95096 RPS2P55-201ENST00000397318 883 ntBASIC17.69■□□□□ 0.42
NKX2-2O95096 AC012618.2-201ENST00000428058 849 ntBASIC17.69■□□□□ 0.42
NKX2-2O95096 AC091390.4-202ENST00000476426 537 ntBASIC17.69■□□□□ 0.42
NKX2-2O95096 AC107956.1-201ENST00000494359 873 ntBASIC17.69■□□□□ 0.42
NKX2-2O95096 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX2-2O95096 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX2-2O95096 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX2-2O95096 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX2-2O95096 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX2-2O95096 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.69■□□□□ 0.42
NKX2-2O95096 TNXA-203ENST00000507684 2038 ntBASIC17.69■□□□□ 0.42
NKX2-2O95096 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.69■□□□□ 0.42
NKX2-2O95096 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX2-2O95096 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX2-2O95096 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX2-2O95096 KRT8P11-201ENST00000409686 1436 ntBASIC17.68■□□□□ 0.42
NKX2-2O95096 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.68■□□□□ 0.42
NKX2-2O95096 FAM197Y1-201ENST00000421178 764 ntBASIC17.68■□□□□ 0.42
NKX2-2O95096 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.68■□□□□ 0.42
NKX2-2O95096 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.68■□□□□ 0.42
NKX2-2O95096 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX2-2O95096 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.68■□□□□ 0.42
NKX2-2O95096 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.68■□□□□ 0.42
NKX2-2O95096 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NKX2-2O95096 AC233702.5-201ENST00000584107 538 ntBASIC17.68■□□□□ 0.42
NKX2-2O95096 CD177P1-201ENST00000606252 935 ntBASIC17.68■□□□□ 0.42
NKX2-2O95096 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NKX2-2O95096 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX2-2O95096 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX2-2O95096 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX2-2O95096 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
NKX2-2O95096 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NKX2-2O95096 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.67■□□□□ 0.42
NKX2-2O95096 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.67■□□□□ 0.42
NKX2-2O95096 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.67■□□□□ 0.42
NKX2-2O95096 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX2-2O95096 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX2-2O95096 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NKX2-2O95096 PRSS44-201ENST00000515154 1146 ntBASIC17.67■□□□□ 0.42
NKX2-2O95096 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.67■□□□□ 0.42
NKX2-2O95096 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX2-2O95096 AP001412.1-201ENST00000608405 714 ntBASIC17.67■□□□□ 0.42
NKX2-2O95096 MIR6786-201ENST00000616843 113 ntBASIC17.67■□□□□ 0.42
NKX2-2O95096 AC130371.2-201ENST00000619443 611 ntBASIC17.67■□□□□ 0.42
NKX2-2O95096 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX2-2O95096 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.67■□□□□ 0.42
NKX2-2O95096 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
NKX2-2O95096 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX2-2O95096 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NKX2-2O95096 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX2-2O95096 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.67■□□□□ 0.42
NKX2-2O95096 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.67■□□□□ 0.42
NKX2-2O95096 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
NKX2-2O95096 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NKX2-2O95096 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX2-2O95096 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX2-2O95096 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms