Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CLSTN1O94985 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLSTN1O94985 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CLSTN1O94985 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC21.17■□□□□ 0.98
CLSTN1O94985 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.17■□□□□ 0.98
CLSTN1O94985 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CLSTN1O94985 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 NBPF21P-201ENST00000425093 1451 ntBASIC21.17■□□□□ 0.98
CLSTN1O94985 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLSTN1O94985 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.17■□□□□ 0.98
CLSTN1O94985 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLSTN1O94985 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CLSTN1O94985 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLSTN1O94985 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLSTN1O94985 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.16■□□□□ 0.98
CLSTN1O94985 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC21.16■□□□□ 0.98
CLSTN1O94985 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.16■□□□□ 0.98
CLSTN1O94985 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLSTN1O94985 AC009237.14-201ENST00000609975 1594 ntBASIC21.16■□□□□ 0.98
CLSTN1O94985 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CLSTN1O94985 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CLSTN1O94985 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.16■□□□□ 0.98
CLSTN1O94985 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.16■□□□□ 0.98
CLSTN1O94985 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
CLSTN1O94985 MTDHP1-201ENST00000605323 784 ntBASIC21.16■□□□□ 0.98
CLSTN1O94985 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CLSTN1O94985 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CLSTN1O94985 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLSTN1O94985 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLSTN1O94985 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CLSTN1O94985 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLSTN1O94985 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.16■□□□□ 0.98
CLSTN1O94985 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CLSTN1O94985 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.15■□□□□ 0.98
CLSTN1O94985 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 AC142381.4-202ENST00000563973 229 ntBASIC21.15■□□□□ 0.98
CLSTN1O94985 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 AC004264.1-201ENST00000608354 794 ntBASIC21.15■□□□□ 0.98
CLSTN1O94985 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
CLSTN1O94985 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.15■□□□□ 0.98
CLSTN1O94985 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CLSTN1O94985 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CLSTN1O94985 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.15■□□□□ 0.98
CLSTN1O94985 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CLSTN1O94985 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLSTN1O94985 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.14■□□□□ 0.98
CLSTN1O94985 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CLSTN1O94985 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLSTN1O94985 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLSTN1O94985 AC125437.2-201ENST00000625180 2167 ntBASIC21.14■□□□□ 0.98
CLSTN1O94985 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLSTN1O94985 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLSTN1O94985 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLSTN1O94985 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLSTN1O94985 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.14■□□□□ 0.98
CLSTN1O94985 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.14■□□□□ 0.98
CLSTN1O94985 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CLSTN1O94985 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLSTN1O94985 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CLSTN1O94985 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CLSTN1O94985 PRORSD1P-201ENST00000295112 541 ntBASIC21.14■□□□□ 0.97
CLSTN1O94985 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.14■□□□□ 0.97
CLSTN1O94985 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLSTN1O94985 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.14■□□□□ 0.97
CLSTN1O94985 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLSTN1O94985 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLSTN1O94985 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms