Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEACAM4O75871 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEACAM4O75871 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEACAM4O75871 AL023284.2-201ENST00000405850 579 ntBASIC17.41■□□□□ 0.38
CEACAM4O75871 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.41■□□□□ 0.38
CEACAM4O75871 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.41■□□□□ 0.38
CEACAM4O75871 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEACAM4O75871 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CEACAM4O75871 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CEACAM4O75871 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CEACAM4O75871 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.4■□□□□ 0.38
CEACAM4O75871 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
CEACAM4O75871 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CEACAM4O75871 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 AC011498.5-201ENST00000592027 486 ntBASIC17.4■□□□□ 0.38
CEACAM4O75871 AC092119.3-201ENST00000612618 583 ntBASIC17.4■□□□□ 0.38
CEACAM4O75871 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.4■□□□□ 0.38
CEACAM4O75871 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.4■□□□□ 0.38
CEACAM4O75871 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.4■□□□□ 0.38
CEACAM4O75871 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.4■□□□□ 0.38
CEACAM4O75871 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.4■□□□□ 0.38
CEACAM4O75871 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CEACAM4O75871 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CEACAM4O75871 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.4■□□□□ 0.38
CEACAM4O75871 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CEACAM4O75871 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.39■□□□□ 0.38
CEACAM4O75871 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CEACAM4O75871 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CEACAM4O75871 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CEACAM4O75871 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CEACAM4O75871 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CEACAM4O75871 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.39■□□□□ 0.37
CEACAM4O75871 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CEACAM4O75871 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.39■□□□□ 0.37
CEACAM4O75871 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.39■□□□□ 0.37
CEACAM4O75871 MIR3652-201ENST00000579335 131 ntBASIC17.39■□□□□ 0.37
CEACAM4O75871 AC092329.2-201ENST00000598402 547 ntBASIC17.39■□□□□ 0.37
CEACAM4O75871 AC024243.1-201ENST00000609234 778 ntBASIC17.39■□□□□ 0.37
CEACAM4O75871 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.39■□□□□ 0.37
CEACAM4O75871 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CEACAM4O75871 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.38■□□□□ 0.37
CEACAM4O75871 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CEACAM4O75871 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CEACAM4O75871 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.38■□□□□ 0.37
CEACAM4O75871 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
CEACAM4O75871 TSSC2-201ENST00000450217 709 ntBASIC17.38■□□□□ 0.37
CEACAM4O75871 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.38■□□□□ 0.37
CEACAM4O75871 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CEACAM4O75871 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CEACAM4O75871 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CEACAM4O75871 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.38■□□□□ 0.37
CEACAM4O75871 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.38■□□□□ 0.37
CEACAM4O75871 MIR3180-5-201ENST00000583743 153 ntBASIC17.38■□□□□ 0.37
CEACAM4O75871 AL121672.3-201ENST00000608644 468 ntBASIC17.38■□□□□ 0.37
CEACAM4O75871 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CEACAM4O75871 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 SDHAP1-207ENST00000440850 2000 ntBASIC17.38■□□□□ 0.37
CEACAM4O75871 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.38■□□□□ 0.37
CEACAM4O75871 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CEACAM4O75871 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
CEACAM4O75871 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CEACAM4O75871 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.37■□□□□ 0.37
CEACAM4O75871 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms