Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCD1O75127 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCD1O75127 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCD1O75127 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PTCD1O75127 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.59■■□□□ 1.53
PTCD1O75127 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCD1O75127 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC24.59■■□□□ 1.53
PTCD1O75127 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.59■■□□□ 1.53
PTCD1O75127 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCD1O75127 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.59■■□□□ 1.53
PTCD1O75127 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCD1O75127 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCD1O75127 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.59■■□□□ 1.53
PTCD1O75127 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
PTCD1O75127 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PTCD1O75127 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PTCD1O75127 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PTCD1O75127 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PTCD1O75127 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PTCD1O75127 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC24.58■■□□□ 1.53
PTCD1O75127 TSPY23P-201ENST00000440136 739 ntBASIC24.58■■□□□ 1.53
PTCD1O75127 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.58■■□□□ 1.53
PTCD1O75127 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.58■■□□□ 1.53
PTCD1O75127 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PTCD1O75127 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
PTCD1O75127 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PTCD1O75127 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.52
PTCD1O75127 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PTCD1O75127 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PTCD1O75127 SDHAP1-207ENST00000440850 2000 ntBASIC24.57■■□□□ 1.52
PTCD1O75127 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.57■■□□□ 1.52
PTCD1O75127 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD1O75127 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD1O75127 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.57■■□□□ 1.52
PTCD1O75127 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD1O75127 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD1O75127 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD1O75127 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD1O75127 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD1O75127 AC026396.1-201ENST00000419388 421 ntBASIC24.57■■□□□ 1.52
PTCD1O75127 AC092597.1-201ENST00000487352 616 ntBASIC24.57■■□□□ 1.52
PTCD1O75127 PP7080-204ENST00000510714 601 ntTSL 3 BASIC24.57■■□□□ 1.52
PTCD1O75127 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC24.57■■□□□ 1.52
PTCD1O75127 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD1O75127 ZNF815P-204ENST00000434898 1737 ntBASIC24.57■■□□□ 1.52
PTCD1O75127 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PTCD1O75127 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCD1O75127 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
PTCD1O75127 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
PTCD1O75127 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PTCD1O75127 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PTCD1O75127 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
PTCD1O75127 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 AC112907.3-201ENST00000577781 2400 ntBASIC24.56■■□□□ 1.52
PTCD1O75127 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PTCD1O75127 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
PTCD1O75127 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTCD1O75127 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.55■■□□□ 1.52
PTCD1O75127 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.55■■□□□ 1.52
PTCD1O75127 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.55■■□□□ 1.52
PTCD1O75127 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
PTCD1O75127 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
PTCD1O75127 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PTCD1O75127 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PTCD1O75127 HBZP1-201ENST00000354915 429 ntBASIC24.55■■□□□ 1.52
PTCD1O75127 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.55■■□□□ 1.52
PTCD1O75127 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC24.55■■□□□ 1.52
PTCD1O75127 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC24.55■■□□□ 1.52
PTCD1O75127 CNP-204ENST00000472031 1019 ntTSL 2 BASIC24.55■■□□□ 1.52
PTCD1O75127 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PTCD1O75127 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
PTCD1O75127 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PTCD1O75127 BCL10-202ENST00000620248 774 ntTSL 5 BASIC24.55■■□□□ 1.52
PTCD1O75127 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PTCD1O75127 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PTCD1O75127 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.55■■□□□ 1.52
PTCD1O75127 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PTCD1O75127 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PTCD1O75127 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.54■■□□□ 1.52
PTCD1O75127 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PTCD1O75127 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCD1O75127 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PTCD1O75127 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PTCD1O75127 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.54■■□□□ 1.52
PTCD1O75127 GPAT2P1-201ENST00000444924 1672 ntBASIC24.54■■□□□ 1.52
PTCD1O75127 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCD1O75127 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PTCD1O75127 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PTCD1O75127 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PTCD1O75127 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC24.54■■□□□ 1.52
PTCD1O75127 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms