Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GMDSO60547 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.92■□□□□ 0.3
GMDSO60547 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GMDSO60547 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.92■□□□□ 0.3
GMDSO60547 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GMDSO60547 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.92■□□□□ 0.3
GMDSO60547 AC006557.6-201ENST00000623071 864 ntBASIC16.92■□□□□ 0.3
GMDSO60547 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
GMDSO60547 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.92■□□□□ 0.3
GMDSO60547 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.92■□□□□ 0.3
GMDSO60547 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GMDSO60547 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GMDSO60547 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GMDSO60547 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.92■□□□□ 0.3
GMDSO60547 AC018553.1-201ENST00000616682 1458 ntBASIC16.92■□□□□ 0.3
GMDSO60547 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GMDSO60547 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.92■□□□□ 0.3
GMDSO60547 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GMDSO60547 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
GMDSO60547 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
GMDSO60547 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.91■□□□□ 0.3
GMDSO60547 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.91■□□□□ 0.3
GMDSO60547 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
GMDSO60547 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.91■□□□□ 0.3
GMDSO60547 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.91■□□□□ 0.3
GMDSO60547 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.91■□□□□ 0.3
GMDSO60547 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GMDSO60547 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.91■□□□□ 0.3
GMDSO60547 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.91■□□□□ 0.3
GMDSO60547 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.91■□□□□ 0.3
GMDSO60547 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.91■□□□□ 0.3
GMDSO60547 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.91■□□□□ 0.3
GMDSO60547 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GMDSO60547 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.91■□□□□ 0.3
GMDSO60547 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.91■□□□□ 0.3
GMDSO60547 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GMDSO60547 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 AL133373.2-201ENST00000623187 2828 ntBASIC16.9■□□□□ 0.3
GMDSO60547 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GMDSO60547 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.9■□□□□ 0.3
GMDSO60547 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.9■□□□□ 0.3
GMDSO60547 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.9■□□□□ 0.3
GMDSO60547 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GMDSO60547 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GMDSO60547 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GMDSO60547 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
GMDSO60547 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GMDSO60547 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GMDSO60547 AC116351.2-201ENST00000606540 1585 ntBASIC16.89■□□□□ 0.3
GMDSO60547 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GMDSO60547 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
GMDSO60547 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GMDSO60547 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GMDSO60547 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GMDSO60547 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GMDSO60547 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms