Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MSI1O43347 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MSI1O43347 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.91■□□□□ 0.78
MSI1O43347 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MSI1O43347 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MSI1O43347 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MSI1O43347 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSI1O43347 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSI1O43347 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSI1O43347 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.9■□□□□ 0.78
MSI1O43347 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MSI1O43347 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSI1O43347 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
MSI1O43347 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.9■□□□□ 0.78
MSI1O43347 CKBP1-201ENST00000565489 1086 ntBASIC19.9■□□□□ 0.78
MSI1O43347 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
MSI1O43347 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSI1O43347 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSI1O43347 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MSI1O43347 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.9■□□□□ 0.78
MSI1O43347 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MSI1O43347 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.9■□□□□ 0.78
MSI1O43347 TEX21P-204ENST00000641479 1693 ntBASIC19.9■□□□□ 0.78
MSI1O43347 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
MSI1O43347 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
MSI1O43347 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.9■□□□□ 0.78
MSI1O43347 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.9■□□□□ 0.78
MSI1O43347 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MSI1O43347 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.89■□□□□ 0.77
MSI1O43347 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MSI1O43347 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MSI1O43347 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MSI1O43347 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
MSI1O43347 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.89■□□□□ 0.77
MSI1O43347 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.89■□□□□ 0.77
MSI1O43347 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MSI1O43347 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.89■□□□□ 0.77
MSI1O43347 LINC01023-201ENST00000606054 436 ntBASIC19.89■□□□□ 0.77
MSI1O43347 AC012306.2-201ENST00000609350 630 ntBASIC19.89■□□□□ 0.77
MSI1O43347 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.89■□□□□ 0.77
MSI1O43347 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.89■□□□□ 0.77
MSI1O43347 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
MSI1O43347 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
MSI1O43347 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.88■□□□□ 0.77
MSI1O43347 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.88■□□□□ 0.77
MSI1O43347 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.88■□□□□ 0.77
MSI1O43347 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MSI1O43347 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.88■□□□□ 0.77
MSI1O43347 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.88■□□□□ 0.77
MSI1O43347 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.88■□□□□ 0.77
MSI1O43347 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.88■□□□□ 0.77
MSI1O43347 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.88■□□□□ 0.77
MSI1O43347 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 AC097493.4-201ENST00000641197 219 ntBASIC19.88■□□□□ 0.77
MSI1O43347 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MSI1O43347 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MSI1O43347 AC116562.4-201ENST00000641316 2276 ntBASIC19.88■□□□□ 0.77
MSI1O43347 AL032819.2-201ENST00000624543 2162 ntBASIC19.88■□□□□ 0.77
MSI1O43347 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.88■□□□□ 0.77
MSI1O43347 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MSI1O43347 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.88■□□□□ 0.77
MSI1O43347 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.88■□□□□ 0.77
MSI1O43347 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.88■□□□□ 0.77
MSI1O43347 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MSI1O43347 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.87■□□□□ 0.77
MSI1O43347 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.87■□□□□ 0.77
MSI1O43347 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MSI1O43347 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 LINC01568-207ENST00000641790 1380 ntBASIC19.87■□□□□ 0.77
MSI1O43347 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.87■□□□□ 0.77
MSI1O43347 INGX-201ENST00000359239 846 ntBASIC19.87■□□□□ 0.77
MSI1O43347 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
MSI1O43347 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.87■□□□□ 0.77
MSI1O43347 C2orf69P3-201ENST00000565542 1120 ntBASIC19.87■□□□□ 0.77
MSI1O43347 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MSI1O43347 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.87■□□□□ 0.77
MSI1O43347 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
MSI1O43347 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MSI1O43347 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms