Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP3O43295 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SRGAP3O43295 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP3O43295 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.8■■□□□ 1.4
SRGAP3O43295 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
SRGAP3O43295 CYP2D8P-201ENST00000433633 1490 ntBASIC23.8■■□□□ 1.4
SRGAP3O43295 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP3O43295 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP3O43295 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.8■■□□□ 1.4
SRGAP3O43295 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.8■■□□□ 1.4
SRGAP3O43295 AC141586.3-201ENST00000562166 1838 ntBASIC23.8■■□□□ 1.4
SRGAP3O43295 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SRGAP3O43295 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC23.79■■□□□ 1.4
SRGAP3O43295 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
SRGAP3O43295 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SRGAP3O43295 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.79■■□□□ 1.4
SRGAP3O43295 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP3O43295 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.79■■□□□ 1.4
SRGAP3O43295 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.79■■□□□ 1.4
SRGAP3O43295 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP3O43295 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP3O43295 PRSS44-201ENST00000515154 1146 ntBASIC23.79■■□□□ 1.4
SRGAP3O43295 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.79■■□□□ 1.4
SRGAP3O43295 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP3O43295 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP3O43295 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP3O43295 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP3O43295 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.79■■□□□ 1.4
SRGAP3O43295 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.79■■□□□ 1.4
SRGAP3O43295 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.79■■□□□ 1.4
SRGAP3O43295 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SRGAP3O43295 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.79■■□□□ 1.4
SRGAP3O43295 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP3O43295 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP3O43295 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.78■■□□□ 1.4
SRGAP3O43295 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SRGAP3O43295 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.78■■□□□ 1.4
SRGAP3O43295 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.78■■□□□ 1.4
SRGAP3O43295 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.78■■□□□ 1.4
SRGAP3O43295 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.78■■□□□ 1.4
SRGAP3O43295 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.78■■□□□ 1.4
SRGAP3O43295 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SRGAP3O43295 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SRGAP3O43295 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP3O43295 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.77■■□□□ 1.4
SRGAP3O43295 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.77■■□□□ 1.4
SRGAP3O43295 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.77■■□□□ 1.4
SRGAP3O43295 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.77■■□□□ 1.4
SRGAP3O43295 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.77■■□□□ 1.4
SRGAP3O43295 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP3O43295 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRGAP3O43295 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SRGAP3O43295 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRGAP3O43295 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRGAP3O43295 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SRGAP3O43295 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.76■■□□□ 1.39
SRGAP3O43295 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SRGAP3O43295 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.76■■□□□ 1.39
SRGAP3O43295 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRGAP3O43295 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRGAP3O43295 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.76■■□□□ 1.39
SRGAP3O43295 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.76■■□□□ 1.39
SRGAP3O43295 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC23.76■■□□□ 1.39
SRGAP3O43295 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRGAP3O43295 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.76■■□□□ 1.39
SRGAP3O43295 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC23.76■■□□□ 1.39
SRGAP3O43295 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SRGAP3O43295 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRGAP3O43295 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRGAP3O43295 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.75■■□□□ 1.39
SRGAP3O43295 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
SRGAP3O43295 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SRGAP3O43295 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SRGAP3O43295 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SRGAP3O43295 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SRGAP3O43295 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC23.75■■□□□ 1.39
SRGAP3O43295 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
SRGAP3O43295 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.75■■□□□ 1.39
SRGAP3O43295 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.75■■□□□ 1.39
SRGAP3O43295 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.75■■□□□ 1.39
SRGAP3O43295 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.75■■□□□ 1.39
SRGAP3O43295 AC010947.1-201ENST00000623454 693 ntBASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms