Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ABCC4O15439 INGX-201ENST00000359239 846 ntBASIC24.4■■□□□ 1.5
ABCC4O15439 EGLN1P1-201ENST00000531623 762 ntBASIC24.4■■□□□ 1.5
ABCC4O15439 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ABCC4O15439 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
ABCC4O15439 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCC4O15439 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
ABCC4O15439 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCC4O15439 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCC4O15439 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCC4O15439 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC24.4■■□□□ 1.5
ABCC4O15439 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCC4O15439 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.4■■□□□ 1.5
ABCC4O15439 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
ABCC4O15439 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCC4O15439 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCC4O15439 AC097488.1-201ENST00000507834 756 ntBASIC24.39■■□□□ 1.5
ABCC4O15439 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.39■■□□□ 1.5
ABCC4O15439 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.39■■□□□ 1.5
ABCC4O15439 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
ABCC4O15439 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC24.39■■□□□ 1.5
ABCC4O15439 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
ABCC4O15439 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCC4O15439 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCC4O15439 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ABCC4O15439 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
ABCC4O15439 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ABCC4O15439 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24.39■■□□□ 1.49
ABCC4O15439 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ABCC4O15439 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
ABCC4O15439 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCC4O15439 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCC4O15439 CRYGFP-201ENST00000418459 633 ntBASIC24.38■■□□□ 1.49
ABCC4O15439 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
ABCC4O15439 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.38■■□□□ 1.49
ABCC4O15439 WWOX-216ENST00000569818 525 ntBASIC24.38■■□□□ 1.49
ABCC4O15439 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ABCC4O15439 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCC4O15439 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCC4O15439 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
ABCC4O15439 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCC4O15439 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.38■■□□□ 1.49
ABCC4O15439 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCC4O15439 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
ABCC4O15439 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
ABCC4O15439 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCC4O15439 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24.38■■□□□ 1.49
ABCC4O15439 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
ABCC4O15439 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ABCC4O15439 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC24.37■■□□□ 1.49
ABCC4O15439 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.37■■□□□ 1.49
ABCC4O15439 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.37■■□□□ 1.49
ABCC4O15439 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC24.37■■□□□ 1.49
ABCC4O15439 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.37■■□□□ 1.49
ABCC4O15439 FAM87A-204ENST00000613235 858 ntBASIC24.37■■□□□ 1.49
ABCC4O15439 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
ABCC4O15439 AC131212.4-201ENST00000623606 975 ntBASIC24.37■■□□□ 1.49
ABCC4O15439 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC24.37■■□□□ 1.49
ABCC4O15439 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.37■■□□□ 1.49
ABCC4O15439 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
ABCC4O15439 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC24.37■■□□□ 1.49
ABCC4O15439 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC24.37■■□□□ 1.49
ABCC4O15439 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ABCC4O15439 RCC2P6-201ENST00000526625 1557 ntBASIC24.37■■□□□ 1.49
ABCC4O15439 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC24.36■■□□□ 1.49
ABCC4O15439 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
ABCC4O15439 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.36■■□□□ 1.49
ABCC4O15439 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.36■■□□□ 1.49
ABCC4O15439 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.36■■□□□ 1.49
ABCC4O15439 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.36■■□□□ 1.49
ABCC4O15439 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC24.36■■□□□ 1.49
ABCC4O15439 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.36■■□□□ 1.49
ABCC4O15439 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
ABCC4O15439 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.36■■□□□ 1.49
ABCC4O15439 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
ABCC4O15439 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCC4O15439 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ABCC4O15439 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCC4O15439 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
ABCC4O15439 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms