Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASQ2O14958 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CASQ2O14958 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.2■□□□□ 0.5
CASQ2O14958 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CASQ2O14958 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CASQ2O14958 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.19■□□□□ 0.5
CASQ2O14958 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
CASQ2O14958 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.19■□□□□ 0.5
CASQ2O14958 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.19■□□□□ 0.5
CASQ2O14958 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CASQ2O14958 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 ESPNP-201ENST00000270691 2015 ntBASIC18.19■□□□□ 0.5
CASQ2O14958 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CASQ2O14958 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.19■□□□□ 0.5
CASQ2O14958 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.19■□□□□ 0.5
CASQ2O14958 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CASQ2O14958 KRT87P-202ENST00000534226 1464 ntBASIC18.19■□□□□ 0.5
CASQ2O14958 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CASQ2O14958 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CASQ2O14958 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CASQ2O14958 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.18■□□□□ 0.5
CASQ2O14958 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CASQ2O14958 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 AC087633.2-202ENST00000565166 1439 ntBASIC18.18■□□□□ 0.5
CASQ2O14958 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.18■□□□□ 0.5
CASQ2O14958 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 AC010141.2-201ENST00000452426 721 ntBASIC18.18■□□□□ 0.5
CASQ2O14958 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.18■□□□□ 0.5
CASQ2O14958 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.18■□□□□ 0.5
CASQ2O14958 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CASQ2O14958 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CASQ2O14958 OR6D1P-203ENST00000641209 4860 ntBASIC18.17■□□□□ 0.5
CASQ2O14958 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.17■□□□□ 0.5
CASQ2O14958 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.17■□□□□ 0.5
CASQ2O14958 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CASQ2O14958 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CASQ2O14958 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.17■□□□□ 0.5
CASQ2O14958 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CASQ2O14958 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.17■□□□□ 0.5
CASQ2O14958 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CASQ2O14958 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CASQ2O14958 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CASQ2O14958 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.17■□□□□ 0.5
CASQ2O14958 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.17■□□□□ 0.5
CASQ2O14958 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CASQ2O14958 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASQ2O14958 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CASQ2O14958 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASQ2O14958 PHGDH-210ENST00000641115 1638 ntBASIC18.16■□□□□ 0.5
CASQ2O14958 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASQ2O14958 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASQ2O14958 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CASQ2O14958 AC009053.2-201ENST00000563701 2365 ntBASIC18.16■□□□□ 0.5
CASQ2O14958 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms