Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 KRT8P11-201ENST00000409686 1436 ntBASIC15.12■□□□□ 0.01
LINC01548A6NM66 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 AC211429.1-201ENST00000415277 523 ntBASIC15.12■□□□□ 0.01
LINC01548A6NM66 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 FITM1-202ENST00000559294 800 ntBASIC15.12■□□□□ 0.01
LINC01548A6NM66 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 AC073912.3-201ENST00000624414 853 ntBASIC15.12■□□□□ 0.01
LINC01548A6NM66 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 TEX21P-204ENST00000641479 1693 ntBASIC15.12■□□□□ 0.01
LINC01548A6NM66 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
LINC01548A6NM66 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC01548A6NM66 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 AC005332.7-201ENST00000614046 2005 ntBASIC15.11■□□□□ 0.01
LINC01548A6NM66 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC01548A6NM66 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC01548A6NM66 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01548A6NM66 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01548A6NM66 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01548A6NM66 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01548A6NM66 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01548A6NM66 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01548A6NM66 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01548A6NM66 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC01548A6NM66 TSPY23P-201ENST00000440136 739 ntBASIC15.1■□□□□ 0.01
LINC01548A6NM66 MFAP1P1-201ENST00000442257 1255 ntBASIC15.1■□□□□ 0.01
LINC01548A6NM66 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.1■□□□□ 0.01
LINC01548A6NM66 DGCR10-201ENST00000609839 495 ntBASIC15.1■□□□□ 0.01
LINC01548A6NM66 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC01548A6NM66 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms