Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MBD3L3A6NE82 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MBD3L3A6NE82 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 AC091076.1-201ENST00000610741 619 ntBASIC16.83■□□□□ 0.28
MBD3L3A6NE82 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.83■□□□□ 0.28
MBD3L3A6NE82 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 CR769767.2-201ENST00000622735 460 ntBASIC16.83■□□□□ 0.28
MBD3L3A6NE82 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MBD3L3A6NE82 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.82■□□□□ 0.28
MBD3L3A6NE82 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 Z82202.1-201ENST00000623446 1880 ntBASIC16.82■□□□□ 0.28
MBD3L3A6NE82 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MBD3L3A6NE82 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MBD3L3A6NE82 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms