Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 AC024243.1-201ENST00000609234 778 ntBASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC163A0A0D9SF12 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 DRAXINP1-201ENST00000437611 948 ntBASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 IFNL4P1-201ENST00000607083 540 ntBASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 AL121772.3-201ENST00000610840 674 ntBASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC163A0A0D9SF12 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 MIR662-201ENST00000384847 95 ntBASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC163A0A0D9SF12 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 GPAT2P1-201ENST00000444924 1672 ntBASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 AP000347.1-202ENST00000435868 847 ntBASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 AL160237.2-201ENST00000556165 472 ntBASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 MIR3180-5-201ENST00000583743 153 ntBASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 LINC01711-201ENST00000598340 967 ntBASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC163A0A0D9SF12 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCDC163A0A0D9SF12 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms