Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 TNPO3-205ENST00000627585 4514 ntTSL 2 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 MAPK10-263ENST00000641052 4307 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SNORD68-201ENST00000363214 84 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 U8.5-201ENST00000364528 136 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-811P-201ENST00000384069 107 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 Y_RNA.448-201ENST00000384185 108 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 MIR147B-201ENST00000390185 80 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 HSPE1P26-201ENST00000405341 275 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AC009237.9-201ENST00000414800 347 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 FAM213AP1-201ENST00000418757 668 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AC015818.7-201ENST00000428754 109 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AC009238.2-201ENST00000431026 355 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 ATP6V1G1P3-201ENST00000442568 280 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AL109933.2-201ENST00000452651 260 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU7-85P-201ENST00000458851 63 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AC044810.1-201ENST00000480271 711 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RPL36P16-201ENST00000496996 306 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SNORA76.1-201ENST00000516313 135 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SNORD45.4-201ENST00000516629 73 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 TRAV8-5-201ENST00000537369 341 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 BRWD1P2-201ENST00000546823 340 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 YWHAEP2-201ENST00000580066 112 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 MIR4253-201ENST00000581187 68 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 YWHAEP3-201ENST00000582767 121 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RN7SL615P-201ENST00000584065 298 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AC022966.2-201ENST00000587434 367 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AC016590.2-201ENST00000592319 375 ntTSL 3 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AL138895.2-201ENST00000603019 178 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 AC090115.4-201ENST00000609970 188 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 MAPK10-383ENST00000642032 3390 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 CASC15-203ENST00000605917 4461 ntBASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KRTAP3-3Q9BYR6 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 AL353795.3-201ENST00000624351 5702 ntBASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 ACTR3C-206ENST00000613959 5142 ntBASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KRTAP3-3Q9BYR6 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms