Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN20P56880 AL356583.2-201ENST00000426536 280 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 RPL7P2-201ENST00000427639 268 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN20P56880 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.56□□□□□ -1.84
CLDN20P56880 USP9YP12-201ENST00000450481 570 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN20P56880 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN20P56880 AC021382.1-201ENST00000483523 359 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 RN7SL271P-201ENST00000487601 295 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 AC112204.1-201ENST00000502591 103 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN20P56880 RNU6-1003P-201ENST00000517099 105 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN20P56880 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN20P56880 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN20P56880 YPEL5P3-201ENST00000547227 352 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN20P56880 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN20P56880 AC099489.2-201ENST00000574976 260 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 MIR3611-201ENST00000584484 83 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 AC010678.1-201ENST00000614118 713 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 AC009509.4-201ENST00000619202 509 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 AC018755.4-201ENST00000619715 454 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLDN20P56880 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLDN20P56880 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
CLDN20P56880 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN20P56880 AC244517.1-201ENST00000606030 2086 ntBASIC3.56□□□□□ -1.84
CLDN20P56880 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CLDN20P56880 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN20P56880 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN20P56880 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN20P56880 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLDN20P56880 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN20P56880 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN20P56880 XIAPP3-201ENST00000312918 795 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 RNU6-1249P-201ENST00000363237 111 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN20P56880 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN20P56880 RNU6-213P-201ENST00000384051 104 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLDN20P56880 AL583834.1-201ENST00000406943 343 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 RPL7AP73-201ENST00000413490 353 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AC092447.6-201ENST00000414578 210 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN20P56880 AL590365.1-201ENST00000450788 243 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AP1S2P1-201ENST00000457344 379 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN20P56880 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN20P56880 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN20P56880 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN20P56880 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLDN20P56880 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC079140.3-201ENST00000511111 550 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN20P56880 AP002748.2-201ENST00000528671 348 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN20P56880 AP002963.1-201ENST00000530590 184 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN20P56880 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN20P56880 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC005771.1-201ENST00000585581 349 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC012557.2-201ENST00000605919 418 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN20P56880 AL590099.1-201ENST00000615276 138 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 AL356585.4-201ENST00000623078 1229 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
CLDN20P56880 UBE3AP2-201ENST00000429033 2259 ntBASIC3.55□□□□□ -1.84
CLDN20P56880 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN20P56880 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN20P56880 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN20P56880 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLDN20P56880 AC092104.1-201ENST00000497346 1441 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN20P56880 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN20P56880 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN20P56880 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN20P56880 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN20P56880 Y_RNA.559-201ENST00000384686 107 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CLDN20P56880 SNORD115.1-201ENST00000391109 76 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 Y_RNA.598-201ENST00000410480 95 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AL359704.1-201ENST00000411586 781 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 HMGN1P14-201ENST00000412459 517 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 CDK8P2-201ENST00000415020 547 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 MTND4LP10-201ENST00000435146 291 ntBASIC3.54□□□□□ -1.84
CLDN20P56880 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN20P56880 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN20P56880 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms