Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 TXNP4-201ENST00000575018 310 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RN7SL230P-201ENST00000580835 303 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-6P-201ENST00000606623 107 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AC120057.5-201ENST00000623840 154 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 AC135776.4-201ENST00000624300 1904 ntBASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHGA4Q9Y5G9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC007842.1-201ENST00000597336 2039 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-989P-201ENST00000362756 107 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-270P-201ENST00000364131 105 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 Y_RNA.238-201ENST00000364441 102 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 SNORA70.3-201ENST00000365075 132 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 RNU6-239P-201ENST00000390990 99 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 SNORD56-201ENST00000413522 71 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC011742.1-201ENST00000431448 434 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AL590128.1-201ENST00000433407 286 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 CRYGGP-201ENST00000443337 145 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC016700.2-201ENST00000446011 156 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC097359.1-201ENST00000447946 463 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC020890.1-201ENST00000491837 504 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 RPS27AP13-201ENST00000498403 237 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 MRPS33P2-201ENST00000507850 322 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC140063.1-201ENST00000541343 259 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AL590032.1-201ENST00000604920 252 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC129915.3-201ENST00000634128 948 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 CASC19-228ENST00000641414 1684 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 RACGAP1P-201ENST00000550663 1879 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 AC020658.2-201ENST00000559030 4020 ntBASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDHGA4Q9Y5G9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 AC109446.4-201ENST00000623235 2755 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 AC093278.2-201ENST00000564956 2485 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 RNA5SP65-201ENST00000363166 119 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 CYCSP17-201ENST00000407870 315 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 RPL31P2-201ENST00000413849 377 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 AL390729.2-201ENST00000416137 156 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 RPL30P3-201ENST00000424262 333 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 AKR1D1P1-201ENST00000457236 936 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 SNORA25.12-201ENST00000516202 82 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 RN7SL199P-201ENST00000578752 281 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 RN7SL656P-201ENST00000579044 281 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 RN7SL404P-201ENST00000582421 281 ntBASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHGA4Q9Y5G9 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHGA4Q9Y5G9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms