Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 GNL3LP1-201ENST00000399458 1643 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 MAPK10-290ENST00000641237 2826 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 PRNCR1-201ENST00000635449 12727 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 MCTP2-203ENST00000451018 2472 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 OR9K1P-202ENST00000641111 3217 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AC034111.1-201ENST00000562143 3770 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5-8SP2-201ENST00000363564 152 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-727P-201ENST00000363592 107 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP50-201ENST00000363731 107 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.173-201ENST00000363776 113 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-668P-201ENST00000364180 107 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-742P-201ENST00000365289 107 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 U1.1-201ENST00000384101 164 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP292-201ENST00000390974 118 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP323-201ENST00000391094 133 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU1-101P-201ENST00000391171 127 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL21P65-201ENST00000406094 466 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP144-201ENST00000410846 116 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AL022718.1-201ENST00000412004 84 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AL512326.2-201ENST00000426359 151 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 TOMM22P2-201ENST00000430735 237 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 HMGB1P27-201ENST00000431429 603 ntBASIC1.58□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL12P14-201ENST00000431782 490 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms