Protein–RNA interactions for Protein: Q8IUG1

KRTAP1-3, Keratin-associated protein 1-3, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP1-3Q8IUG1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP1-3Q8IUG1 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 RNU6-235P-201ENST00000362644 107 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 RNU4-90P-201ENST00000362773 141 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 RNU6-199P-201ENST00000362954 107 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 Y_RNA.143-201ENST00000363520 106 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 RNU6-497P-201ENST00000365316 104 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 SNORA16A-201ENST00000384342 137 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 RNU6-460P-201ENST00000391158 108 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AL583834.1-201ENST00000406943 343 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 TMBIM7P-201ENST00000418074 855 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC093162.1-201ENST00000419682 124 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 CALM2P2-201ENST00000428512 440 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AL353997.1-201ENST00000432936 108 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AL731534.1-201ENST00000434711 269 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC004386.2-201ENST00000441858 148 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC009237.7-201ENST00000447357 229 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 DYNLL1P6-201ENST00000503440 264 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 RNU2-56P-201ENST00000516826 190 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC233699.1-201ENST00000569955 1168 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 MIR5583-1-201ENST00000580941 59 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 MIR4697-201ENST00000582977 78 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC069307.1-201ENST00000602820 447 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 AL161423.1-201ENST00000613700 262 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 PHKBP1-201ENST00000450951 1951 ntBASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP1-3Q8IUG1 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 PANDAR-201ENST00000629595 1506 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 HMGB1P5-201ENST00000255320 642 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 Y_RNA.7-201ENST00000362352 102 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 MIR548A2-201ENST00000384956 97 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 RNU6-440P-201ENST00000390882 105 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 RNA5SP56-201ENST00000410277 118 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 LSM1P1-201ENST00000438629 273 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 MRPL48P1-201ENST00000445390 636 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 DUTP1-201ENST00000493631 470 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 AC146944.2-203ENST00000502493 354 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 AC139495.1-202ENST00000513164 354 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 RN7SKP57-201ENST00000517248 293 ntBASIC4.64□□□□□ -1.67
KRTAP1-3Q8IUG1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms