Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC018816.2-201ENST00000621460 353 ntBASIC3.61□□□□□ -1.83
GPC3P51654 AC026422.1-201ENST00000623961 452 ntBASIC3.61□□□□□ -1.83
GPC3P51654 MIR7153-201ENST00000637758 57 ntBASIC3.61□□□□□ -1.83
GPC3P51654 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.61□□□□□ -1.83
GPC3P51654 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.61□□□□□ -1.83
GPC3P51654 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
GPC3P51654 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.6□□□□□ -1.83
GPC3P51654 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GPC3P51654 AL049780.3-201ENST00000624612 1583 ntBASIC3.6□□□□□ -1.83
GPC3P51654 HMGB1P5-201ENST00000255320 642 ntBASIC3.6□□□□□ -1.83
GPC3P51654 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GPC3P51654 AL035405.1-201ENST00000400795 710 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AL355615.1-201ENST00000406187 641 ntBASIC3.6□□□□□ -1.83
GPC3P51654 RPL31P12-201ENST00000422587 358 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AL353678.1-201ENST00000422735 741 ntBASIC3.6□□□□□ -1.83
GPC3P51654 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GPC3P51654 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.6□□□□□ -1.83
GPC3P51654 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.6□□□□□ -1.83
GPC3P51654 RPL17P49-201ENST00000443728 411 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AL096829.2-201ENST00000446582 742 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.6□□□□□ -1.83
GPC3P51654 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.6□□□□□ -1.83
GPC3P51654 AC109925.1-201ENST00000478069 331 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.6□□□□□ -1.83
GPC3P51654 BOLA3P3-201ENST00000505182 232 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.6□□□□□ -1.83
GPC3P51654 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.6□□□□□ -1.83
GPC3P51654 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.6□□□□□ -1.83
GPC3P51654 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AP003355.1-201ENST00000518956 587 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AP001317.1-201ENST00000531194 960 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AC068339.2-201ENST00000534395 618 ntBASIC3.6□□□□□ -1.83
GPC3P51654 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GPC3P51654 CYB5AP5-201ENST00000549779 389 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AC008127.2-201ENST00000549925 1075 ntBASIC3.6□□□□□ -1.83
GPC3P51654 EEF1B2P4-201ENST00000551398 348 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AL391156.1-201ENST00000554965 554 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.6□□□□□ -1.83
GPC3P51654 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.6□□□□□ -1.83
GPC3P51654 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GPC3P51654 AL355810.1-201ENST00000614629 552 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AP003476.1-201ENST00000623984 516 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.6□□□□□ -1.83
GPC3P51654 AC026634.1-201ENST00000634369 198 ntBASIC3.6□□□□□ -1.83
GPC3P51654 AL136520.1-201ENST00000600311 1322 ntBASIC3.6□□□□□ -1.83
GPC3P51654 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GPC3P51654 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GPC3P51654 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
GPC3P51654 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
GPC3P51654 SGO1P2-201ENST00000429458 1589 ntBASIC3.59□□□□□ -1.83
GPC3P51654 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.59□□□□□ -1.83
GPC3P51654 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GPC3P51654 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
GPC3P51654 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GPC3P51654 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
GPC3P51654 SNORA51.6-201ENST00000384151 125 ntBASIC3.59□□□□□ -1.83
GPC3P51654 RPL22P22-201ENST00000395439 379 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC109780.2-201ENST00000413467 845 ntBASIC3.59□□□□□ -1.83
GPC3P51654 YPEL5P1-201ENST00000419731 367 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC012065.2-201ENST00000421295 375 ntBASIC3.59□□□□□ -1.83
GPC3P51654 SNRPEP4-201ENST00000435815 279 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.59□□□□□ -1.83
GPC3P51654 AC000041.1-201ENST00000439655 175 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.59□□□□□ -1.83
GPC3P51654 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.59□□□□□ -1.83
GPC3P51654 snoU109.4-201ENST00000458953 143 ntBASIC3.59□□□□□ -1.83
GPC3P51654 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
GPC3P51654 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.59□□□□□ -1.83
GPC3P51654 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.59□□□□□ -1.83
GPC3P51654 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.59□□□□□ -1.83
GPC3P51654 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.59□□□□□ -1.83
GPC3P51654 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.59□□□□□ -1.83
GPC3P51654 AC087894.1-201ENST00000538359 518 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.59□□□□□ -1.83
GPC3P51654 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.59□□□□□ -1.83
GPC3P51654 AC104072.1-201ENST00000568817 668 ntBASIC3.59□□□□□ -1.83
GPC3P51654 MIR4666A-201ENST00000580160 79 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC126365.2-201ENST00000580630 379 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.59□□□□□ -1.83
GPC3P51654 AC010738.1-201ENST00000604970 987 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC124312.4-201ENST00000605533 310 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AP000238.1-201ENST00000608759 426 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AL157817.1-201ENST00000614264 790 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AL110115.1-201ENST00000614396 364 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC253576.2-201ENST00000618815 580 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AL138955.1-201ENST00000622881 1040 ntBASIC3.59□□□□□ -1.83
GPC3P51654 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.59□□□□□ -1.83
GPC3P51654 SRP72P2-201ENST00000344851 1979 ntBASIC3.59□□□□□ -1.83
GPC3P51654 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
GPC3P51654 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
GPC3P51654 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
GPC3P51654 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.59□□□□□ -1.84
GPC3P51654 AC007496.3-201ENST00000624987 3443 ntBASIC3.58□□□□□ -1.84
GPC3P51654 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
GPC3P51654 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GPC3P51654 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.58□□□□□ -1.84
GPC3P51654 RNU1-75P-201ENST00000347264 129 ntBASIC3.58□□□□□ -1.84
GPC3P51654 RNU5B-1-201ENST00000363286 116 ntBASIC3.58□□□□□ -1.84
GPC3P51654 SNORA48.5-201ENST00000391143 135 ntBASIC3.58□□□□□ -1.84
GPC3P51654 AL136133.1-201ENST00000413694 376 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms