RNA–Protein interactions for RNA: ENST00000518956.1

AP003355.1-201, humanhuman

BASIC

Gene AP003355.1, Length 587 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003355.1-201ENST00000518956 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
AP003355.1-201ENST00000518956 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
AP003355.1-201ENST00000518956 PHF23Q9BUL5 403 aaPredicted RBP22.01■■□□□ 1.11
AP003355.1-201ENST00000518956 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
AP003355.1-201ENST00000518956 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
AP003355.1-201ENST00000518956 FOXD1Q16676 465 aa19.94■□□□□ 0.78
AP003355.1-201ENST00000518956 ADRA2BP18089 450 aa19.36■□□□□ 0.69
AP003355.1-201ENST00000518956 PPP6R1Q9UPN7 881 aa19.36■□□□□ 0.69
AP003355.1-201ENST00000518956 PIAS4Q8N2W9 510 aaPredicted RBP18.87■□□□□ 0.61
AP003355.1-201ENST00000518956 MSH5O43196 834 aa18.31■□□□□ 0.52
AP003355.1-201ENST00000518956 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
AP003355.1-201ENST00000518956 KCNA4P22459 653 aa17.86■□□□□ 0.45
AP003355.1-201ENST00000518956 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
AP003355.1-201ENST00000518956 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
AP003355.1-201ENST00000518956 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
AP003355.1-201ENST00000518956 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
AP003355.1-201ENST00000518956 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
AP003355.1-201ENST00000518956 DMRT2Q9Y5R5 561 aa17.2■□□□□ 0.34
AP003355.1-201ENST00000518956 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
AP003355.1-201ENST00000518956 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
AP003355.1-201ENST00000518956 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
AP003355.1-201ENST00000518956 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
AP003355.1-201ENST00000518956 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
AP003355.1-201ENST00000518956 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
AP003355.1-201ENST00000518956 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
AP003355.1-201ENST00000518956 ZBTB22O15209 634 aa16.42■□□□□ 0.22
AP003355.1-201ENST00000518956 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
AP003355.1-201ENST00000518956 SLC4A2P04920 1241 aa16.32■□□□□ 0.2
AP003355.1-201ENST00000518956 POTEDQ86YR6 584 aa16.27■□□□□ 0.2
AP003355.1-201ENST00000518956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.16■□□□□ 0.18
AP003355.1-201ENST00000518956 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
AP003355.1-201ENST00000518956 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
AP003355.1-201ENST00000518956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
AP003355.1-201ENST00000518956 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
AP003355.1-201ENST00000518956 ATXN8OSP0DMR3 200 aa15.77■□□□□ 0.12
AP003355.1-201ENST00000518956 SAMD1Q6SPF0 538 aaPredicted RBP15.75■□□□□ 0.11
AP003355.1-201ENST00000518956 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
AP003355.1-201ENST00000518956 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
AP003355.1-201ENST00000518956 APLP2Q06481 763 aa15.58■□□□□ 0.08
AP003355.1-201ENST00000518956 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
AP003355.1-201ENST00000518956 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
AP003355.1-201ENST00000518956 CAPN15O75808 1086 aa15.35■□□□□ 0.05
AP003355.1-201ENST00000518956 TRHP20396 242 aaPredicted RBP15.33■□□□□ 0.04
AP003355.1-201ENST00000518956 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
AP003355.1-201ENST00000518956 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
AP003355.1-201ENST00000518956 POLA2Q14181 598 aa15.12■□□□□ 0.01
AP003355.1-201ENST00000518956 ABCB7O75027 752 aa15.07■□□□□ 0
AP003355.1-201ENST00000518956 DSG3P32926 999 aa15.02■□□□□ -0
AP003355.1-201ENST00000518956 FBLN2P98095 1184 aa14.94□□□□□ -0.02
AP003355.1-201ENST00000518956 FKBP8Q14318 412 aa14.94□□□□□ -0.02
AP003355.1-201ENST00000518956 MKRN4PQ13434 485 aaPredicted RBP14.91□□□□□ -0.02
AP003355.1-201ENST00000518956 ZBTB12Q9Y330 459 aaPredicted RBP14.9□□□□□ -0.02
AP003355.1-201ENST00000518956 SPDYE4A6NLX3 237 aa14.71□□□□□ -0.05
AP003355.1-201ENST00000518956 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
AP003355.1-201ENST00000518956 SPDYE2BA6NHP3 402 aa14.5□□□□□ -0.09
AP003355.1-201ENST00000518956 SPDYE6P0CI01 402 aa14.5□□□□□ -0.09
AP003355.1-201ENST00000518956 SPDYE2Q495Y8 402 aa14.5□□□□□ -0.09
AP003355.1-201ENST00000518956 ZNF692Q9BU19 519 aaPredicted RBP14.5□□□□□ -0.09
AP003355.1-201ENST00000518956 PROM2Q8N271 834 aa14.47□□□□□ -0.09
AP003355.1-201ENST00000518956 SSUH2Q9Y2M2 353 aa14.41□□□□□ -0.1
AP003355.1-201ENST00000518956 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
AP003355.1-201ENST00000518956 RBM42Q9BTD8 480 aaKnown RBP14.32□□□□□ -0.12
AP003355.1-201ENST00000518956 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
AP003355.1-201ENST00000518956 AKT1S1Q96B36 256 aa14.18□□□□□ -0.14
AP003355.1-201ENST00000518956 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
AP003355.1-201ENST00000518956 STAG3Q9UJ98 1225 aa14.12□□□□□ -0.15
AP003355.1-201ENST00000518956 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
AP003355.1-201ENST00000518956 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
AP003355.1-201ENST00000518956 AMER1Q5JTC6 1135 aaPredicted RBP14□□□□□ -0.17
AP003355.1-201ENST00000518956 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
AP003355.1-201ENST00000518956 IFNLR1Q8IU57 520 aaPredicted RBP13.96□□□□□ -0.17
AP003355.1-201ENST00000518956 RTN4Q9NQC3 1192 aaKnown RBP13.96□□□□□ -0.17
AP003355.1-201ENST00000518956 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
AP003355.1-201ENST00000518956 MIER1Q8N108 512 aa13.93□□□□□ -0.18
AP003355.1-201ENST00000518956 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
AP003355.1-201ENST00000518956 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
AP003355.1-201ENST00000518956 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
AP003355.1-201ENST00000518956 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
AP003355.1-201ENST00000518956 SPOCK2Q92563 424 aa13.77□□□□□ -0.21
AP003355.1-201ENST00000518956 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.21
AP003355.1-201ENST00000518956 CREBZFQ9NS37 354 aa13.73□□□□□ -0.21
AP003355.1-201ENST00000518956 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
AP003355.1-201ENST00000518956 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
AP003355.1-201ENST00000518956 CHADLQ6NUI6 762 aa13.59□□□□□ -0.23
AP003355.1-201ENST00000518956 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
AP003355.1-201ENST00000518956 PKD2Q13563 968 aa13.57□□□□□ -0.24
AP003355.1-201ENST00000518956 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
AP003355.1-201ENST00000518956 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
AP003355.1-201ENST00000518956 NUBP1P53384 320 aa13.53□□□□□ -0.24
AP003355.1-201ENST00000518956 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
AP003355.1-201ENST00000518956 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
AP003355.1-201ENST00000518956 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
AP003355.1-201ENST00000518956 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
AP003355.1-201ENST00000518956 GSE1Q14687 1217 aa13.46□□□□□ -0.25
AP003355.1-201ENST00000518956 DCAF8Q5TAQ9 597 aa13.45□□□□□ -0.26
AP003355.1-201ENST00000518956 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
AP003355.1-201ENST00000518956 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
AP003355.1-201ENST00000518956 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
AP003355.1-201ENST00000518956 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
AP003355.1-201ENST00000518956 RGL2O15211 777 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms