RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 MYT1Q01538 1121 aa6.41□□□□□ -1.38
PKHD1L1-201ENST00000378402 PELP1Q8IZL8 1130 aaKnown RBP6.2□□□□□ -1.42
PKHD1L1-201ENST00000378402 TTBK1Q5TCY1 1321 aaPredicted RBP6.16□□□□□ -1.42
PKHD1L1-201ENST00000378402 ERICH6Q7L0X2 663 aa5.66□□□□□ -1.5
PKHD1L1-201ENST00000378402 YTHDC1Q96MU7 727 aaKnown RBP5.49□□□□□ -1.53
PKHD1L1-201ENST00000378402 ZEB1P37275 1124 aaPredicted RBP5.45□□□□□ -1.54
PKHD1L1-201ENST00000378402 MYT1LQ9UL68 1186 aa5.42□□□□□ -1.54
PKHD1L1-201ENST00000378402 CLSPNQ9HAW4 1339 aa5.41□□□□□ -1.54
PKHD1L1-201ENST00000378402 EHMT2Q96KQ7 1210 aa5.38□□□□□ -1.55
PKHD1L1-201ENST00000378402 CCER1Q8TC90 406 aaPredicted RBP5.37□□□□□ -1.55
PKHD1L1-201ENST00000378402 CENPBP07199 599 aaPredicted RBP5.35□□□□□ -1.55
PKHD1L1-201ENST00000378402 RANGAP1P46060 587 aaPredicted RBP5.26□□□□□ -1.57
PKHD1L1-201ENST00000378402 SLC24A1O60721 1099 aa5.2□□□□□ -1.58
PKHD1L1-201ENST00000378402 GLIPR1L2Q4G1C9 344 aa5.2□□□□□ -1.58
PKHD1L1-201ENST00000378402 SHROOM4Q9ULL8 1493 aa5.14□□□□□ -1.59
PKHD1L1-201ENST00000378402 DAXXQ9UER7 740 aaPredicted RBP5.1□□□□□ -1.59
PKHD1L1-201ENST00000378402 HRCP23327 699 aa5.1□□□□□ -1.59
PKHD1L1-201ENST00000378402 NISCHQ9Y2I1 1504 aa5.05□□□□□ -1.6
PKHD1L1-201ENST00000378402 DCAF8L2P0C7V8 631 aa5.05□□□□□ -1.6
PKHD1L1-201ENST00000378402 ARID4BQ4LE39 1312 aaPredicted RBP5.05□□□□□ -1.6
PKHD1L1-201ENST00000378402 ERICH6BQ5W0A0 696 aa5.01□□□□□ -1.61
PKHD1L1-201ENST00000378402 NCLP19338 710 aaKnown RBP5□□□□□ -1.61
PKHD1L1-201ENST00000378402 ZNF326Q5BKZ1 582 aaKnown RBP4.99□□□□□ -1.61
PKHD1L1-201ENST00000378402 FAM9AQ8IZU1 332 aaPredicted RBP4.98□□□□□ -1.61
PKHD1L1-201ENST00000378402 HMGB1P09429 215 aaKnown RBP4.96□□□□□ -1.62
PKHD1L1-201ENST00000378402 NEFLP07196 543 aa4.95□□□□□ -1.62
PKHD1L1-201ENST00000378402 APLP2Q06481 763 aa4.94□□□□□ -1.62
PKHD1L1-201ENST00000378402 TRIM26Q12899 539 aaPredicted RBP4.93□□□□□ -1.62
PKHD1L1-201ENST00000378402 DCAF1Q9Y4B6 1507 aa4.92□□□□□ -1.62
PKHD1L1-201ENST00000378402 CCDC180Q9P1Z9 1646 aa4.91□□□□□ -1.62
PKHD1L1-201ENST00000378402 ANP32AP39687 249 aaKnown RBP4.9□□□□□ -1.63
PKHD1L1-201ENST00000378402 ARXQ96QS3 562 aa4.89□□□□□ -1.63
PKHD1L1-201ENST00000378402 RTL5Q5HYW3 569 aaPredicted RBP4.89□□□□□ -1.63
PKHD1L1-201ENST00000378402 EIF5BO60841 1220 aaKnown RBP4.89□□□□□ -1.63
PKHD1L1-201ENST00000378402 POLR3GLQ9BT43 218 aa4.87□□□□□ -1.63
PKHD1L1-201ENST00000378402 ANP32EQ9BTT0 268 aa4.87□□□□□ -1.63
PKHD1L1-201ENST00000378402 CDK11AQ9UQ88 783 aaPredicted RBP4.86□□□□□ -1.63
PKHD1L1-201ENST00000378402 ANP32BQ92688 251 aaKnown RBP4.84□□□□□ -1.63
PKHD1L1-201ENST00000378402 ACIN1Q9UKV3 1341 aaKnown RBP4.84□□□□□ -1.63
PKHD1L1-201ENST00000378402 LAS1LQ9Y4W2 734 aaKnown RBP4.83□□□□□ -1.64
PKHD1L1-201ENST00000378402 TRIM44Q96DX7 344 aaPredicted RBP4.83□□□□□ -1.64
PKHD1L1-201ENST00000378402 PTMSP20962 102 aa4.82□□□□□ -1.64
PKHD1L1-201ENST00000378402 ARID3AQ99856 593 aa4.81□□□□□ -1.64
PKHD1L1-201ENST00000378402 NEUROD1Q13562 356 aa4.8□□□□□ -1.64
PKHD1L1-201ENST00000378402 AMER1Q5JTC6 1135 aaPredicted RBP4.78□□□□□ -1.64
PKHD1L1-201ENST00000378402 USP35Q9P2H5 1018 aa4.78□□□□□ -1.64
PKHD1L1-201ENST00000378402 TNNT2P45379 298 aaPredicted RBP4.78□□□□□ -1.64
PKHD1L1-201ENST00000378402 BCL11AQ9H165 835 aa4.75□□□□□ -1.65
PKHD1L1-201ENST00000378402 NCBP3Q53F19 620 aaKnown RBP4.75□□□□□ -1.65
PKHD1L1-201ENST00000378402 PCGF6Q9BYE7 350 aa4.75□□□□□ -1.65
PKHD1L1-201ENST00000378402 HOMEZQ8IX15 550 aa4.73□□□□□ -1.65
PKHD1L1-201ENST00000378402 ZNF316A6NFI3 1004 aaPredicted RBP4.73□□□□□ -1.65
PKHD1L1-201ENST00000378402 RSPH6AQ9H0K4 717 aa4.73□□□□□ -1.65
PKHD1L1-201ENST00000378402 MTERF4Q7Z6M4 381 aaKnown RBP4.72□□□□□ -1.65
PKHD1L1-201ENST00000378402 SCAF1Q9H7N4 1312 aaKnown RBP4.72□□□□□ -1.65
PKHD1L1-201ENST00000378402 DIEXFQ68CQ4 756 aaKnown RBP4.72□□□□□ -1.65
PKHD1L1-201ENST00000378402 GTF3C3Q9Y5Q9 886 aa4.69□□□□□ -1.66
PKHD1L1-201ENST00000378402 TAF3Q5VWG9 929 aa4.68□□□□□ -1.66
PKHD1L1-201ENST00000378402 CALRP27797 417 aaKnown RBP4.68□□□□□ -1.66
PKHD1L1-201ENST00000378402 MAP7D2Q96T17 732 aa4.67□□□□□ -1.66
PKHD1L1-201ENST00000378402 UBE2Q2Q8WVN8 375 aa4.67□□□□□ -1.66
PKHD1L1-201ENST00000378402 FBXO3Q9UK99 471 aa4.67□□□□□ -1.66
PKHD1L1-201ENST00000378402 PPM1GO15355 546 aaPredicted RBP4.67□□□□□ -1.66
PKHD1L1-201ENST00000378402 HMGB1P1B2RPK0 211 aaPredicted RBP4.64□□□□□ -1.67
PKHD1L1-201ENST00000378402 NBR1Q14596 966 aa4.64□□□□□ -1.67
PKHD1L1-201ENST00000378402 NEFMP07197 916 aa4.64□□□□□ -1.67
PKHD1L1-201ENST00000378402 PRKCSHP14314 528 aaPredicted RBP4.63□□□□□ -1.67
PKHD1L1-201ENST00000378402 DDRGK1Q96HY6 314 aa4.62□□□□□ -1.67
PKHD1L1-201ENST00000378402 A0A0U1RQG5 324 aaPredicted RBP4.62□□□□□ -1.67
PKHD1L1-201ENST00000378402 CNGB1Q14028 1251 aaPredicted RBP4.62□□□□□ -1.67
PKHD1L1-201ENST00000378402 ISY1Q9ULR0 285 aaKnown RBP4.61□□□□□ -1.67
PKHD1L1-201ENST00000378402 PNNQ9H307 717 aaKnown RBP4.61□□□□□ -1.67
PKHD1L1-201ENST00000378402 FANCIQ9NVI1 1328 aa4.61□□□□□ -1.67
PKHD1L1-201ENST00000378402 GOLGA6L3A6NEY3 463 aa4.6□□□□□ -1.67
PKHD1L1-201ENST00000378402 CDK11BP21127 795 aaKnown RBP4.6□□□□□ -1.67
PKHD1L1-201ENST00000378402 TIMELESSQ9UNS1 1208 aa4.59□□□□□ -1.67
PKHD1L1-201ENST00000378402 TSPYL1Q9H0U9 437 aa4.59□□□□□ -1.67
PKHD1L1-201ENST00000378402 L1TD1Q5T7N2 865 aaKnown RBP4.59□□□□□ -1.68
PKHD1L1-201ENST00000378402 SUPT5HO00267 1087 aaKnown RBP4.58□□□□□ -1.68
PKHD1L1-201ENST00000378402 PKNOX2Q96KN3 472 aa4.58□□□□□ -1.68
PKHD1L1-201ENST00000378402 HSP90B1P14625 803 aaKnown RBP4.58□□□□□ -1.68
PKHD1L1-201ENST00000378402 PTMAP06454 111 aaKnown RBP4.58□□□□□ -1.68
PKHD1L1-201ENST00000378402 RRP9O43818 475 aaKnown RBP4.57□□□□□ -1.68
PKHD1L1-201ENST00000378402 TAF7LQ5H9L4 462 aa4.57□□□□□ -1.68
PKHD1L1-201ENST00000378402 BCANQ96GW7 911 aa4.57□□□□□ -1.68
PKHD1L1-201ENST00000378402 NOP58Q9Y2X3 529 aaKnown RBP4.56□□□□□ -1.68
PKHD1L1-201ENST00000378402 BCCIPQ9P287 314 aaKnown RBP eCLIP4.56□□□□□ -1.68
PKHD1L1-201ENST00000378402 PABPN1Q86U42 306 aaKnown RBP eCLIP4.55□□□□□ -1.68
PKHD1L1-201ENST00000378402 CFAP44Q96MT7 982 aa4.55□□□□□ -1.68
PKHD1L1-201ENST00000378402 ZBTB47Q9UFB7 747 aaPredicted RBP4.55□□□□□ -1.68
PKHD1L1-201ENST00000378402 EEA1Q15075 1411 aa4.54□□□□□ -1.68
PKHD1L1-201ENST00000378402 AXDND1Q5T1B0 1012 aaPredicted RBP4.54□□□□□ -1.68
PKHD1L1-201ENST00000378402 PODXL2Q9NZ53 605 aa4.54□□□□□ -1.68
PKHD1L1-201ENST00000378402 PPARGC1BQ86YN6 1023 aaKnown RBP4.53□□□□□ -1.68
PKHD1L1-201ENST00000378402 GOLGA6L22H0YM25 854 aa4.53□□□□□ -1.68
PKHD1L1-201ENST00000378402 HSP90AA1P07900 732 aaKnown RBP4.52□□□□□ -1.69
PKHD1L1-201ENST00000378402 UPF2Q9HAU5 1272 aaKnown RBP4.52□□□□□ -1.69
PKHD1L1-201ENST00000378402 IL27Q8NEV9 243 aa4.52□□□□□ -1.69
PKHD1L1-201ENST00000378402 HSP90AA2PQ14568 343 aaPredicted RBP4.51□□□□□ -1.69
PKHD1L1-201ENST00000378402 BECN1Q14457 450 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms