Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13CQ709C8 RN7SKP247-201ENST00000411094 308 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 SNORD13-201ENST00000459299 104 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 RN7SKP60-201ENST00000516985 239 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 HMGB1P41-201ENST00000520234 440 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC105137.2-201ENST00000569073 466 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13CQ709C8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13CQ709C8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 LINC00888-204ENST00000487386 421 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS13CQ709C8 AC092650.2-201ENST00000619984 902 ntBASIC1.73□□□□□ -2.13
VPS13CQ709C8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13CQ709C8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13CQ709C8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13CQ709C8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 AC009237.2-201ENST00000421358 284 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 RPL36AP6-201ENST00000435770 321 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 XKRY-201ENST00000510392 1100 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 RNA5SP490-201ENST00000517141 136 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13CQ709C8 SNRPGP19-201ENST00000603826 189 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 BX664608.1-201ENST00000610519 487 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 CYP3A51P-201ENST00000633513 256 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 AC083843.2-201ENST00000568248 6253 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13CQ709C8 Z73417.1-201ENST00000447373 778 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 AC104090.1-201ENST00000506341 1171 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 AP003467.2-201ENST00000520175 319 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 SUB1P3-201ENST00000564581 315 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 AMZ2P1-203ENST00000565833 850 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 AL445437.1-201ENST00000623157 3087 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 AC006971.1-201ENST00000407916 4486 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VPS13CQ709C8 SAR1AP2-201ENST00000392696 594 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 MIR5007-201ENST00000583098 95 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 AC093591.3-201ENST00000634516 308 ntBASIC1.72□□□□□ -2.13
VPS13CQ709C8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
VPS13CQ709C8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
VPS13CQ709C8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
VPS13CQ709C8 RNU6-707P-201ENST00000364647 95 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 RPS15AP12-201ENST00000419498 388 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AL450263.2-201ENST00000439400 589 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC092798.1-201ENST00000458542 409 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 RPL5P13-201ENST00000462840 709 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC092851.1-201ENST00000535964 478 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC005951.1-201ENST00000576706 485 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC022709.1-201ENST00000615967 87 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC009831.4-201ENST00000620744 325 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
VPS13CQ709C8 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 RNU4-44P-201ENST00000363050 141 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 RNU1-91P-201ENST00000364746 163 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 MIR137-201ENST00000385223 102 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 AP000889.2-201ENST00000532684 490 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 MIR6766-201ENST00000622641 72 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC026241.1-201ENST00000517873 2142 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 RNU1-138P-201ENST00000384093 164 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC093392.2-201ENST00000450682 337 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC002984.1-201ENST00000591692 448 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.71□□□□□ -2.14
VPS13CQ709C8 MIR7153-201ENST00000637758 57 ntBASIC1.71□□□□□ -2.14
VPS13CQ709C8 AC093536.2-201ENST00000565257 1406 ntBASIC1.7□□□□□ -2.14
VPS13CQ709C8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13CQ709C8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
VPS13CQ709C8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms