RNA–Protein interactions for RNA: ENST00000447198.2

AC003988.1-201, humanhuman

TSL 5 BASIC

Gene AC003988.1, Length 578 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003988.1-201ENST00000447198 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
AC003988.1-201ENST00000447198 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
AC003988.1-201ENST00000447198 CHIC1Q5VXU3 224 aa15.66■□□□□ 0.1
AC003988.1-201ENST00000447198 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
AC003988.1-201ENST00000447198 PHF23Q9BUL5 403 aaPredicted RBP14.14□□□□□ -0.15
AC003988.1-201ENST00000447198 FOXD1Q16676 465 aa13.55□□□□□ -0.24
AC003988.1-201ENST00000447198 MSH5O43196 834 aa12.97□□□□□ -0.33
AC003988.1-201ENST00000447198 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
AC003988.1-201ENST00000447198 POTEHQ6S545 545 aa12.65□□□□□ -0.38
AC003988.1-201ENST00000447198 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
AC003988.1-201ENST00000447198 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
AC003988.1-201ENST00000447198 ADRA2BP18089 450 aa12.01□□□□□ -0.49
AC003988.1-201ENST00000447198 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
AC003988.1-201ENST00000447198 PLSCR2Q9NRY7 297 aa11.48□□□□□ -0.57
AC003988.1-201ENST00000447198 DMRT2Q9Y5R5 561 aa11.35□□□□□ -0.59
AC003988.1-201ENST00000447198 MAPK8IP2Q13387 824 aaPredicted RBP11.25□□□□□ -0.61
AC003988.1-201ENST00000447198 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
AC003988.1-201ENST00000447198 SCAF1Q9H7N4 1312 aaKnown RBP10.96□□□□□ -0.65
AC003988.1-201ENST00000447198 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
AC003988.1-201ENST00000447198 C1QBPQ07021 282 aaKnown RBP10.79□□□□□ -0.68
AC003988.1-201ENST00000447198 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
AC003988.1-201ENST00000447198 HOXD11P31277 338 aaPredicted RBP10.67□□□□□ -0.7
AC003988.1-201ENST00000447198 DNAJC5BQ9UF47 199 aa10.48□□□□□ -0.73
AC003988.1-201ENST00000447198 RNF216Q9NWF9 866 aaPredicted RBP10.38□□□□□ -0.75
AC003988.1-201ENST00000447198 PPP4R3CPQ6ZMV5 832 aa10.28□□□□□ -0.76
AC003988.1-201ENST00000447198 CNKSR2Q8WXI2 1034 aa10.27□□□□□ -0.77
AC003988.1-201ENST00000447198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.07□□□□□ -0.8
AC003988.1-201ENST00000447198 DSG3P32926 999 aa10.05□□□□□ -0.8
AC003988.1-201ENST00000447198 LHX8Q68G74 356 aa10.05□□□□□ -0.8
AC003988.1-201ENST00000447198 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
AC003988.1-201ENST00000447198 CAPN15O75808 1086 aa9.87□□□□□ -0.83
AC003988.1-201ENST00000447198 U3KPZ7 1027 aaPredicted RBP9.85□□□□□ -0.83
AC003988.1-201ENST00000447198 CHRDL2Q6WN34 429 aa9.82□□□□□ -0.84
AC003988.1-201ENST00000447198 NCBP3Q53F19 620 aaKnown RBP9.65□□□□□ -0.86
AC003988.1-201ENST00000447198 POTEMA6NI47 508 aa9.63□□□□□ -0.87
AC003988.1-201ENST00000447198 ABCB7O75027 752 aa9.59□□□□□ -0.87
AC003988.1-201ENST00000447198 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
AC003988.1-201ENST00000447198 HAX1O00165 279 aa9.56□□□□□ -0.88
AC003988.1-201ENST00000447198 NPM3O75607 178 aaKnown RBP9.55□□□□□ -0.88
AC003988.1-201ENST00000447198 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
AC003988.1-201ENST00000447198 ZNF219Q9P2Y4 722 aaPredicted RBP9.54□□□□□ -0.88
AC003988.1-201ENST00000447198 POTEGQ6S5H5 508 aa9.51□□□□□ -0.89
AC003988.1-201ENST00000447198 APLP2Q06481 763 aa9.45□□□□□ -0.9
AC003988.1-201ENST00000447198 EVX2Q03828 476 aa9.42□□□□□ -0.9
AC003988.1-201ENST00000447198 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
AC003988.1-201ENST00000447198 SLC4A2P04920 1241 aa9.33□□□□□ -0.92
AC003988.1-201ENST00000447198 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
AC003988.1-201ENST00000447198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.28□□□□□ -0.92
AC003988.1-201ENST00000447198 HNRNPUL2Q1KMD3 747 aaKnown RBP9.28□□□□□ -0.92
AC003988.1-201ENST00000447198 AKT1S1Q96B36 256 aa9.23□□□□□ -0.93
AC003988.1-201ENST00000447198 SAMD1Q6SPF0 538 aaPredicted RBP9.2□□□□□ -0.94
AC003988.1-201ENST00000447198 FXR2P51116 673 aaKnown RBP eCLIP9.14□□□□□ -0.95
AC003988.1-201ENST00000447198 POLA2Q14181 598 aa9.14□□□□□ -0.95
AC003988.1-201ENST00000447198 REM2Q8IYK8 340 aaPredicted RBP9.14□□□□□ -0.95
AC003988.1-201ENST00000447198 PITPNM1O00562 1244 aa9.05□□□□□ -0.96
AC003988.1-201ENST00000447198 GABBR2O75899 941 aa8.96□□□□□ -0.98
AC003988.1-201ENST00000447198 ZBTB12Q9Y330 459 aaPredicted RBP8.92□□□□□ -0.98
AC003988.1-201ENST00000447198 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
AC003988.1-201ENST00000447198 OTUD5Q96G74 571 aa8.89□□□□□ -0.99
AC003988.1-201ENST00000447198 KCNA4P22459 653 aa8.88□□□□□ -0.99
AC003988.1-201ENST00000447198 C19orf67A6NJJ6 358 aa8.87□□□□□ -0.99
AC003988.1-201ENST00000447198 MYCNP04198 464 aaPredicted RBP8.84□□□□□ -0.99
AC003988.1-201ENST00000447198 POTEIP0CG38 1075 aa8.83□□□□□ -1
AC003988.1-201ENST00000447198 PRKAR2AP13861 404 aaKnown RBP8.78□□□□□ -1
AC003988.1-201ENST00000447198 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
AC003988.1-201ENST00000447198 ATF5Q9Y2D1 282 aaPredicted RBP8.7□□□□□ -1.02
AC003988.1-201ENST00000447198 MMRN1Q13201 1228 aa8.66□□□□□ -1.02
AC003988.1-201ENST00000447198 SPDYE2BA6NHP3 402 aa8.6□□□□□ -1.03
AC003988.1-201ENST00000447198 SPDYE6P0CI01 402 aa8.6□□□□□ -1.03
AC003988.1-201ENST00000447198 SPDYE2Q495Y8 402 aa8.6□□□□□ -1.03
AC003988.1-201ENST00000447198 SPDYE1Q8NFV5 336 aaPredicted RBP8.6□□□□□ -1.03
AC003988.1-201ENST00000447198 CLEC11AQ9Y240 323 aa8.57□□□□□ -1.04
AC003988.1-201ENST00000447198 CDAN1Q8IWY9 1227 aa8.56□□□□□ -1.04
AC003988.1-201ENST00000447198 CLCN6P51797 869 aa8.52□□□□□ -1.05
AC003988.1-201ENST00000447198 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
AC003988.1-201ENST00000447198 POTEB2H3BUK9 544 aa8.51□□□□□ -1.05
AC003988.1-201ENST00000447198 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.06
AC003988.1-201ENST00000447198 DCBLD2Q96PD2 775 aa8.45□□□□□ -1.06
AC003988.1-201ENST00000447198 FAM163AQ96GL9 167 aaPredicted RBP8.44□□□□□ -1.06
AC003988.1-201ENST00000447198 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
AC003988.1-201ENST00000447198 SPNS2Q8IVW8 549 aa8.42□□□□□ -1.06
AC003988.1-201ENST00000447198 SLC4A1APQ9BWU0 796 aaKnown RBP8.37□□□□□ -1.07
AC003988.1-201ENST00000447198 FBLN2P98095 1184 aa8.36□□□□□ -1.07
AC003988.1-201ENST00000447198 FOXD4L1Q9NU39 408 aa8.36□□□□□ -1.07
AC003988.1-201ENST00000447198 PRR29P0C7W0 189 aa8.35□□□□□ -1.07
AC003988.1-201ENST00000447198 ZNF579Q8NAF0 562 aaKnown RBP8.34□□□□□ -1.07
AC003988.1-201ENST00000447198 FARP1Q9Y4F1 1045 aaPredicted RBP8.34□□□□□ -1.07
AC003988.1-201ENST00000447198 ZNF692Q9BU19 519 aaPredicted RBP8.33□□□□□ -1.08
AC003988.1-201ENST00000447198 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
AC003988.1-201ENST00000447198 GALR2O43603 387 aaPredicted RBP8.27□□□□□ -1.09
AC003988.1-201ENST00000447198 ZRANB1Q9UGI0 708 aa8.21□□□□□ -1.1
AC003988.1-201ENST00000447198 PABPN1Q86U42 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
AC003988.1-201ENST00000447198 POTEJP0CG39 1038 aa8.19□□□□□ -1.1
AC003988.1-201ENST00000447198 ATXN8OSP0DMR3 200 aa8.19□□□□□ -1.1
AC003988.1-201ENST00000447198 ZBTB22O15209 634 aa8.18□□□□□ -1.1
AC003988.1-201ENST00000447198 PELP1Q8IZL8 1130 aaKnown RBP8.18□□□□□ -1.1
AC003988.1-201ENST00000447198 MAMSTRQ6ZN01 415 aa8.13□□□□□ -1.11
AC003988.1-201ENST00000447198 METRNQ9UJH8 293 aa8.11□□□□□ -1.11
AC003988.1-201ENST00000447198 ASTLQ6HA08 431 aaPredicted RBP8.08□□□□□ -1.12
AC003988.1-201ENST00000447198 C7P10643 843 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms