RNA–Protein interactions for RNA: ENST00000547094.1

LINC02399-201, Transcript of long intergenic non-protein coding RNA 2399, humanhuman

TSL 2 BASIC

Gene LINC02399, Length 400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02399-201ENST00000547094 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
LINC02399-201ENST00000547094 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
LINC02399-201ENST00000547094 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
LINC02399-201ENST00000547094 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
LINC02399-201ENST00000547094 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
LINC02399-201ENST00000547094 FOXD1Q16676 465 aa20.02■□□□□ 0.8
LINC02399-201ENST00000547094 ADRA2BP18089 450 aa19.31■□□□□ 0.68
LINC02399-201ENST00000547094 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
LINC02399-201ENST00000547094 PIAS4Q8N2W9 510 aaPredicted RBP18.96■□□□□ 0.63
LINC02399-201ENST00000547094 MSH5O43196 834 aa18.51■□□□□ 0.55
LINC02399-201ENST00000547094 PPP4R3CPQ6ZMV5 832 aa17.91■□□□□ 0.46
LINC02399-201ENST00000547094 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
LINC02399-201ENST00000547094 KCNA4P22459 653 aa17.55■□□□□ 0.4
LINC02399-201ENST00000547094 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
LINC02399-201ENST00000547094 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
LINC02399-201ENST00000547094 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
LINC02399-201ENST00000547094 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
LINC02399-201ENST00000547094 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
LINC02399-201ENST00000547094 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
LINC02399-201ENST00000547094 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
LINC02399-201ENST00000547094 POTEDQ86YR6 584 aa16.81■□□□□ 0.28
LINC02399-201ENST00000547094 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
LINC02399-201ENST00000547094 DNAJC5BQ9UF47 199 aa16.64■□□□□ 0.25
LINC02399-201ENST00000547094 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
LINC02399-201ENST00000547094 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
LINC02399-201ENST00000547094 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC02399-201ENST00000547094 FOXD4L1Q9NU39 408 aa16.19■□□□□ 0.18
LINC02399-201ENST00000547094 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
LINC02399-201ENST00000547094 ZBTB22O15209 634 aa16.1■□□□□ 0.17
LINC02399-201ENST00000547094 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
LINC02399-201ENST00000547094 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
LINC02399-201ENST00000547094 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
LINC02399-201ENST00000547094 RNF39Q9H2S5 420 aa15.81■□□□□ 0.12
LINC02399-201ENST00000547094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
LINC02399-201ENST00000547094 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
LINC02399-201ENST00000547094 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
LINC02399-201ENST00000547094 APLP2Q06481 763 aa15.67■□□□□ 0.1
LINC02399-201ENST00000547094 C1QBPQ07021 282 aaKnown RBP15.66■□□□□ 0.1
LINC02399-201ENST00000547094 ATXN8OSP0DMR3 200 aa15.61■□□□□ 0.09
LINC02399-201ENST00000547094 CAPN15O75808 1086 aa15.42■□□□□ 0.06
LINC02399-201ENST00000547094 CACNB1Q02641 598 aaPredicted RBP15.41■□□□□ 0.06
LINC02399-201ENST00000547094 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
LINC02399-201ENST00000547094 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
LINC02399-201ENST00000547094 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
LINC02399-201ENST00000547094 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
LINC02399-201ENST00000547094 ABCB7O75027 752 aa15.1■□□□□ 0.01
LINC02399-201ENST00000547094 POLA2Q14181 598 aa15.09■□□□□ 0.01
LINC02399-201ENST00000547094 DSG3P32926 999 aa15.07■□□□□ 0
LINC02399-201ENST00000547094 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
LINC02399-201ENST00000547094 FBLN2P98095 1184 aa14.89□□□□□ -0.03
LINC02399-201ENST00000547094 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
LINC02399-201ENST00000547094 FKBP8Q14318 412 aa14.63□□□□□ -0.07
LINC02399-201ENST00000547094 OSCARQ8IYS5 282 aa14.58□□□□□ -0.08
LINC02399-201ENST00000547094 SPDYE4A6NLX3 237 aa14.54□□□□□ -0.08
LINC02399-201ENST00000547094 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
LINC02399-201ENST00000547094 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
LINC02399-201ENST00000547094 SPDYE2Q495Y8 402 aa14.48□□□□□ -0.09
LINC02399-201ENST00000547094 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
LINC02399-201ENST00000547094 ZNF692Q9BU19 519 aaPredicted RBP14.45□□□□□ -0.1
LINC02399-201ENST00000547094 SSUH2Q9Y2M2 353 aa14.33□□□□□ -0.12
LINC02399-201ENST00000547094 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC02399-201ENST00000547094 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
LINC02399-201ENST00000547094 PROM2Q8N271 834 aa14.22□□□□□ -0.13
LINC02399-201ENST00000547094 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
LINC02399-201ENST00000547094 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
LINC02399-201ENST00000547094 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
LINC02399-201ENST00000547094 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
LINC02399-201ENST00000547094 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
LINC02399-201ENST00000547094 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
LINC02399-201ENST00000547094 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
LINC02399-201ENST00000547094 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
LINC02399-201ENST00000547094 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
LINC02399-201ENST00000547094 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
LINC02399-201ENST00000547094 MIER1Q8N108 512 aa13.8□□□□□ -0.2
LINC02399-201ENST00000547094 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
LINC02399-201ENST00000547094 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
LINC02399-201ENST00000547094 ZBTB47Q9UFB7 747 aaPredicted RBP13.68□□□□□ -0.22
LINC02399-201ENST00000547094 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
LINC02399-201ENST00000547094 CREBZFQ9NS37 354 aa13.65□□□□□ -0.22
LINC02399-201ENST00000547094 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC02399-201ENST00000547094 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
LINC02399-201ENST00000547094 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
LINC02399-201ENST00000547094 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
LINC02399-201ENST00000547094 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
LINC02399-201ENST00000547094 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC02399-201ENST00000547094 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
LINC02399-201ENST00000547094 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
LINC02399-201ENST00000547094 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
LINC02399-201ENST00000547094 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
LINC02399-201ENST00000547094 NUBP1P53384 320 aa13.36□□□□□ -0.27
LINC02399-201ENST00000547094 FAM212AQ96EL1 285 aa13.35□□□□□ -0.27
LINC02399-201ENST00000547094 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
LINC02399-201ENST00000547094 GSE1Q14687 1217 aa13.33□□□□□ -0.28
LINC02399-201ENST00000547094 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
LINC02399-201ENST00000547094 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
LINC02399-201ENST00000547094 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
LINC02399-201ENST00000547094 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
LINC02399-201ENST00000547094 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
LINC02399-201ENST00000547094 POTEHQ6S545 545 aa13.23□□□□□ -0.29
LINC02399-201ENST00000547094 PKD2Q13563 968 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms