Protein–RNA interactions for Protein: Q9Y5J5

PHLDA3, Pleckstrin homology-like domain family A member 3, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3Q9Y5J5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 DUX4L16-201ENST00000555130 1264 ntBASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 AC141586.3-201ENST00000562166 1838 ntBASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PHLDA3Q9Y5J5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 AC116351.2-201ENST00000606540 1585 ntBASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 OR10C1-204ENST00000622521 1039 ntBASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 AC231657.2-201ENST00000624556 255 ntBASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.18□□□□□ -0.14
PHLDA3Q9Y5J5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 CROCCP3-202ENST00000420820 1947 ntBASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 AC007322.1-201ENST00000426983 750 ntBASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 AC011767.1-201ENST00000617410 1153 ntBASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.17□□□□□ -0.14
PHLDA3Q9Y5J5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PHLDA3Q9Y5J5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHLDA3Q9Y5J5 AC010980.2-201ENST00000587099 1412 ntBASIC14.16□□□□□ -0.14
PHLDA3Q9Y5J5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHLDA3Q9Y5J5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms