Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHGA6Q9Y5G7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 AL049597.2-201ENST00000565575 961 ntBASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 AC093484.2-201ENST00000580996 2166 ntBASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHGA6Q9Y5G7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 MESTP1-201ENST00000404287 994 ntBASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 KRT18P35-201ENST00000510488 1269 ntBASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 AP005242.2-201ENST00000580065 1175 ntBASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHGA6Q9Y5G7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
PCDHGA6Q9Y5G7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 TERF1P1-201ENST00000311003 1181 ntBASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 TUBB8P6-201ENST00000436895 1288 ntBASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 AC073508.3-201ENST00000619697 1419 ntBASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 AC018553.1-201ENST00000616682 1458 ntBASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHGA6Q9Y5G7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 SLC25A3P1-201ENST00000443844 931 ntBASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHGA6Q9Y5G7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms