Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPH3AQ9Y2J0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPH3AQ9Y2J0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RPH3AQ9Y2J0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RPH3AQ9Y2J0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPH3AQ9Y2J0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPH3AQ9Y2J0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
RPH3AQ9Y2J0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPH3AQ9Y2J0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 KRT17P2-201ENST00000300992 1314 ntBASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.58■□□□□ 0.4
RPH3AQ9Y2J0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 AP003071.4-201ENST00000562276 1284 ntBASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 AL445675.2-201ENST00000620291 557 ntBASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 AC131212.4-201ENST00000623606 975 ntBASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPH3AQ9Y2J0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 AL031985.4-201ENST00000642138 673 ntBASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.56■□□□□ 0.4
RPH3AQ9Y2J0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms