Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 AC211429.1-201ENST00000415277 523 ntBASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GTF3C4Q9UKN8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GTF3C4Q9UKN8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
GTF3C4Q9UKN8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
GTF3C4Q9UKN8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GTF3C4Q9UKN8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GTF3C4Q9UKN8 AC079598.2-202ENST00000546624 1451 ntBASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 UNC93B2-201ENST00000285383 730 ntBASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 MESTP1-201ENST00000404287 994 ntBASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GTF3C4Q9UKN8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 TNXA-203ENST00000507684 2038 ntBASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 LINC01465-201ENST00000408887 1940 ntBASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 AC087499.1-201ENST00000418141 1075 ntBASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 AC011506.1-201ENST00000474329 610 ntBASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GTF3C4Q9UKN8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 ECEL1P3-201ENST00000427961 737 ntBASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 B3GAT3P1-201ENST00000471720 806 ntBASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 AC026271.3-201ENST00000571884 352 ntBASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 AP000525.1-201ENST00000608286 694 ntBASIC20.62■□□□□ 0.89
GTF3C4Q9UKN8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms