Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
RABGEF1Q9UJ41 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RABGEF1Q9UJ41 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 SNORA78-201ENST00000459373 127 ntBASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 AL023875.1-201ENST00000640777 796 ntBASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RABGEF1Q9UJ41 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.66■□□□□ 0.74
RABGEF1Q9UJ41 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 AC120498.9-201ENST00000339021 3867 ntBASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 AC124016.1-201ENST00000609552 612 ntBASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RABGEF1Q9UJ41 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms