Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
DNMT3BQ9UBC3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3BQ9UBC3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
DNMT3BQ9UBC3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3BQ9UBC3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
DNMT3BQ9UBC3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DNMT3BQ9UBC3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DNMT3BQ9UBC3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 AC005332.1-201ENST00000577698 1310 ntBASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
DNMT3BQ9UBC3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.02■□□□□ 0.79
DNMT3BQ9UBC3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
DNMT3BQ9UBC3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.02■□□□□ 0.79
DNMT3BQ9UBC3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 MIR4674-201ENST00000582457 87 ntBASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 AC116407.4-201ENST00000623319 1061 ntBASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DNMT3BQ9UBC3 AC104417.2-201ENST00000562989 1793 ntBASIC20■□□□□ 0.79
DNMT3BQ9UBC3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 AP000523.1-201ENST00000398242 1049 ntBASIC20■□□□□ 0.79
DNMT3BQ9UBC3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 AC093458.2-201ENST00000623150 629 ntBASIC20■□□□□ 0.79
DNMT3BQ9UBC3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
DNMT3BQ9UBC3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms