Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL20A1Q9P218 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL20A1Q9P218 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL20A1Q9P218 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL20A1Q9P218 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL20A1Q9P218 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL20A1Q9P218 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 AC063952.2-201ENST00000498792 1227 ntBASIC21.74■■□□□ 1.07
COL20A1Q9P218 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 AC008622.2-201ENST00000617006 1229 ntBASIC21.74■■□□□ 1.07
COL20A1Q9P218 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL20A1Q9P218 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL20A1Q9P218 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL20A1Q9P218 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.74■■□□□ 1.07
COL20A1Q9P218 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 AFG3L1P-217ENST00000557444 2447 ntBASIC21.73■■□□□ 1.07
COL20A1Q9P218 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 AC022616.7-201ENST00000525383 220 ntBASIC21.73■■□□□ 1.07
COL20A1Q9P218 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL20A1Q9P218 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
COL20A1Q9P218 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.72■■□□□ 1.07
COL20A1Q9P218 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.72■■□□□ 1.07
COL20A1Q9P218 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
COL20A1Q9P218 TSPY21P-201ENST00000433481 731 ntBASIC21.72■■□□□ 1.07
COL20A1Q9P218 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.72■■□□□ 1.07
COL20A1Q9P218 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.72■■□□□ 1.07
COL20A1Q9P218 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.72■■□□□ 1.07
COL20A1Q9P218 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.72■■□□□ 1.07
COL20A1Q9P218 AC011558.1-201ENST00000623459 338 ntBASIC21.72■■□□□ 1.07
COL20A1Q9P218 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL20A1Q9P218 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
COL20A1Q9P218 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL20A1Q9P218 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL20A1Q9P218 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL20A1Q9P218 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL20A1Q9P218 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL20A1Q9P218 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.71■■□□□ 1.07
COL20A1Q9P218 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL20A1Q9P218 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL20A1Q9P218 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.71■■□□□ 1.07
COL20A1Q9P218 COX11P1-201ENST00000489116 835 ntBASIC21.71■■□□□ 1.07
COL20A1Q9P218 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL20A1Q9P218 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL20A1Q9P218 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
COL20A1Q9P218 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.71■■□□□ 1.07
COL20A1Q9P218 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.71■■□□□ 1.07
COL20A1Q9P218 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
COL20A1Q9P218 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
COL20A1Q9P218 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
COL20A1Q9P218 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.7■■□□□ 1.06
COL20A1Q9P218 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.7■■□□□ 1.06
COL20A1Q9P218 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL20A1Q9P218 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.7■■□□□ 1.06
COL20A1Q9P218 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.7■■□□□ 1.06
COL20A1Q9P218 AL023973.1-201ENST00000624619 620 ntBASIC21.7■■□□□ 1.06
COL20A1Q9P218 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL20A1Q9P218 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL20A1Q9P218 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COL20A1Q9P218 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL20A1Q9P218 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL20A1Q9P218 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL20A1Q9P218 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL20A1Q9P218 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.69■■□□□ 1.06
COL20A1Q9P218 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL20A1Q9P218 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
COL20A1Q9P218 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.69■■□□□ 1.06
COL20A1Q9P218 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms