Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.57■□□□□ 0.56
CUEDC1Q9NWM3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CUEDC1Q9NWM3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CUEDC1Q9NWM3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CUEDC1Q9NWM3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CUEDC1Q9NWM3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CUEDC1Q9NWM3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.57■□□□□ 0.56
CUEDC1Q9NWM3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CUEDC1Q9NWM3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.57■□□□□ 0.56
CUEDC1Q9NWM3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 Z85996.1-201ENST00000494644 937 ntBASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.56■□□□□ 0.56
CUEDC1Q9NWM3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 AC087499.1-201ENST00000418141 1075 ntBASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CUEDC1Q9NWM3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 AL445228.2-201ENST00000605589 952 ntBASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 AC131212.4-201ENST00000623606 975 ntBASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.54■□□□□ 0.56
CUEDC1Q9NWM3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CUEDC1Q9NWM3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms