Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC24.2■■□□□ 1.46
CHMP4BQ9H444 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC24.19■■□□□ 1.46
CHMP4BQ9H444 IRX1P1-201ENST00000438849 1838 ntBASIC24.19■■□□□ 1.46
CHMP4BQ9H444 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHMP4BQ9H444 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.19■■□□□ 1.46
CHMP4BQ9H444 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHMP4BQ9H444 NIFKP9-201ENST00000419265 221 ntBASIC24.19■■□□□ 1.46
CHMP4BQ9H444 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
CHMP4BQ9H444 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.19■■□□□ 1.46
CHMP4BQ9H444 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
CHMP4BQ9H444 AC098818.2-201ENST00000564925 2320 ntBASIC24.19■■□□□ 1.46
CHMP4BQ9H444 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHMP4BQ9H444 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHMP4BQ9H444 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 TNXA-203ENST00000507684 2038 ntBASIC24.18■■□□□ 1.46
CHMP4BQ9H444 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 KSR1P1-201ENST00000446298 240 ntBASIC24.18■■□□□ 1.46
CHMP4BQ9H444 AP002982.1-201ENST00000492365 877 ntBASIC24.18■■□□□ 1.46
CHMP4BQ9H444 RPPH1-201ENST00000516869 333 ntBASIC24.18■■□□□ 1.46
CHMP4BQ9H444 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 ITM2C-210ENST00000620962 501 ntBASIC24.18■■□□□ 1.46
CHMP4BQ9H444 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHMP4BQ9H444 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC24.17■■□□□ 1.46
CHMP4BQ9H444 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 HTR7P1-201ENST00000538670 1336 ntBASIC24.16■■□□□ 1.46
CHMP4BQ9H444 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 RARRES2P10-201ENST00000564312 460 ntBASIC24.16■■□□□ 1.46
CHMP4BQ9H444 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CHMP4BQ9H444 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms