Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
SPTBN4Q9H254 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.34■□□□□ 0.53
SPTBN4Q9H254 AL121603.2-201ENST00000557373 2117 ntBASIC18.33■□□□□ 0.53
SPTBN4Q9H254 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPTBN4Q9H254 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.33■□□□□ 0.53
SPTBN4Q9H254 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 AC091607.1-201ENST00000490318 1060 ntBASIC18.33■□□□□ 0.52
SPTBN4Q9H254 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPTBN4Q9H254 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 AL160286.2-201ENST00000567150 934 ntBASIC18.32■□□□□ 0.52
SPTBN4Q9H254 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.32■□□□□ 0.52
SPTBN4Q9H254 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.32■□□□□ 0.52
SPTBN4Q9H254 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 AC023274.1-201ENST00000418278 595 ntBASIC18.31■□□□□ 0.52
SPTBN4Q9H254 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 BNIP3P18-201ENST00000593976 575 ntBASIC18.31■□□□□ 0.52
SPTBN4Q9H254 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.31■□□□□ 0.52
SPTBN4Q9H254 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 AC002347.1-201ENST00000569543 541 ntBASIC18.3■□□□□ 0.52
SPTBN4Q9H254 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 AC079602.3-201ENST00000623931 403 ntBASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.3■□□□□ 0.52
SPTBN4Q9H254 AC040169.1-201ENST00000565382 521 ntBASIC18.3■□□□□ 0.52
SPTBN4Q9H254 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPTBN4Q9H254 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.29■□□□□ 0.52
SPTBN4Q9H254 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPTBN4Q9H254 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms