Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 POU5F1P4-201ENST00000413175 1085 ntBASIC15.53■□□□□ 0.08
NKX6-2Q9C056 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 AC008175.2-201ENST00000612840 297 ntBASIC15.53■□□□□ 0.08
NKX6-2Q9C056 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 AC012317.2-201ENST00000623305 2251 ntBASIC15.53■□□□□ 0.08
NKX6-2Q9C056 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NKX6-2Q9C056 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.52■□□□□ 0.08
NKX6-2Q9C056 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NKX6-2Q9C056 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NKX6-2Q9C056 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 AD000864.1-201ENST00000624076 2295 ntBASIC15.51■□□□□ 0.07
NKX6-2Q9C056 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 BX842568.3-201ENST00000418104 571 ntBASIC15.51■□□□□ 0.07
NKX6-2Q9C056 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 AL512631.2-201ENST00000604634 923 ntBASIC15.51■□□□□ 0.07
NKX6-2Q9C056 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.51■□□□□ 0.07
NKX6-2Q9C056 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms