Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
MUC4Q99102 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
MUC4Q99102 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14□□□□□ -0.17
MUC4Q99102 ADM-205ENST00000528544 586 ntTSL 2 BASIC14□□□□□ -0.17
MUC4Q99102 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14□□□□□ -0.17
MUC4Q99102 AC120498.8-201ENST00000614275 531 ntBASIC14□□□□□ -0.17
MUC4Q99102 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
MUC4Q99102 AL512353.2-201ENST00000448759 1962 ntBASIC14□□□□□ -0.17
MUC4Q99102 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14□□□□□ -0.17
MUC4Q99102 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14□□□□□ -0.17
MUC4Q99102 AL138781.2-201ENST00000617896 1843 ntBASIC14□□□□□ -0.17
MUC4Q99102 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MUC4Q99102 SDHAP1-207ENST00000440850 2000 ntBASIC14□□□□□ -0.17
MUC4Q99102 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.99□□□□□ -0.17
MUC4Q99102 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.99□□□□□ -0.17
MUC4Q99102 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MUC4Q99102 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MUC4Q99102 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
MUC4Q99102 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
MUC4Q99102 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.99□□□□□ -0.17
MUC4Q99102 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.99□□□□□ -0.17
MUC4Q99102 AC120498.9-201ENST00000339021 3867 ntBASIC13.99□□□□□ -0.17
MUC4Q99102 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MUC4Q99102 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.99□□□□□ -0.17
MUC4Q99102 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.99□□□□□ -0.17
MUC4Q99102 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.99□□□□□ -0.17
MUC4Q99102 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.99□□□□□ -0.17
MUC4Q99102 AP003097.1-201ENST00000530657 1135 ntBASIC13.99□□□□□ -0.17
MUC4Q99102 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MUC4Q99102 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.98□□□□□ -0.17
MUC4Q99102 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.98□□□□□ -0.17
MUC4Q99102 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
MUC4Q99102 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.98□□□□□ -0.17
MUC4Q99102 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC13.98□□□□□ -0.17
MUC4Q99102 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
MUC4Q99102 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 AL390719.1-204ENST00000412397 1219 ntBASIC13.98□□□□□ -0.17
MUC4Q99102 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.98□□□□□ -0.17
MUC4Q99102 HLA-B-256ENST00000639848 1089 ntBASIC13.98□□□□□ -0.17
MUC4Q99102 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.98□□□□□ -0.17
MUC4Q99102 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.98□□□□□ -0.17
MUC4Q99102 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MUC4Q99102 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.98□□□□□ -0.17
MUC4Q99102 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MUC4Q99102 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MUC4Q99102 AC009113.1-201ENST00000570267 2443 ntBASIC13.97□□□□□ -0.17
MUC4Q99102 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MUC4Q99102 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms