Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 AC125437.2-201ENST00000625180 2167 ntBASIC19.93■□□□□ 0.78
CDK5RAP1Q96SZ6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 SLC25A3P1-201ENST00000443844 931 ntBASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK5RAP1Q96SZ6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 TSPY23P-201ENST00000440136 739 ntBASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 AL023803.3-201ENST00000615559 522 ntBASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK5RAP1Q96SZ6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 Z82202.1-201ENST00000623446 1880 ntBASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 HMGA1P5-201ENST00000412453 271 ntBASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 AL353719.1-201ENST00000566847 864 ntBASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 AL512604.3-201ENST00000569583 964 ntBASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 AC092338.2-201ENST00000568827 1415 ntBASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK5RAP1Q96SZ6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CDK5RAP1Q96SZ6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 AL137013.1-201ENST00000432946 1228 ntBASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP1Q96SZ6 AC073130.3-201ENST00000624389 2278 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms