Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.91■□□□□ 0.46
MS4A4EQ96PG1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A4EQ96PG1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A4EQ96PG1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
MS4A4EQ96PG1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A4EQ96PG1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MS4A4EQ96PG1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 TSPY21P-201ENST00000433481 731 ntBASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 ITM2C-210ENST00000620962 501 ntBASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 FP475955.4-201ENST00000623131 1990 ntBASIC17.9■□□□□ 0.46
MS4A4EQ96PG1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
MS4A4EQ96PG1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
MS4A4EQ96PG1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
MS4A4EQ96PG1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
MS4A4EQ96PG1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 IRX1P1-201ENST00000438849 1838 ntBASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 NIFKP9-201ENST00000419265 221 ntBASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 TSPY20P-201ENST00000450910 630 ntBASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 RPPH1-201ENST00000516869 333 ntBASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 AL445675.2-201ENST00000620291 557 ntBASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MS4A4EQ96PG1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 KRT18P29-201ENST00000397031 1267 ntBASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 AL353807.1-201ENST00000427475 662 ntBASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 AP002982.1-201ENST00000492365 877 ntBASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 HTR7P1-201ENST00000538670 1336 ntBASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 AL049812.1-201ENST00000432563 2267 ntBASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MS4A4EQ96PG1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.87■□□□□ 0.45
MS4A4EQ96PG1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms