Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 PRORSD1P-201ENST00000295112 541 ntBASIC18.12■□□□□ 0.49
COL21A1Q96P44 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 C1QBPP2-201ENST00000528754 825 ntBASIC18.12■□□□□ 0.49
COL21A1Q96P44 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
COL21A1Q96P44 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL21A1Q96P44 AC020763.4-201ENST00000623414 4170 ntBASIC18.12■□□□□ 0.49
COL21A1Q96P44 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL21A1Q96P44 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL21A1Q96P44 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL21A1Q96P44 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL21A1Q96P44 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL21A1Q96P44 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL21A1Q96P44 TMEM191A-211ENST00000637163 1067 ntBASIC18.11■□□□□ 0.49
COL21A1Q96P44 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 LINC01465-201ENST00000408887 1940 ntBASIC18.11■□□□□ 0.49
COL21A1Q96P44 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL21A1Q96P44 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL21A1Q96P44 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.11■□□□□ 0.49
COL21A1Q96P44 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 LETM1P2-201ENST00000597330 2178 ntBASIC18.1■□□□□ 0.49
COL21A1Q96P44 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 NBPF21P-201ENST00000425093 1451 ntBASIC18.1■□□□□ 0.49
COL21A1Q96P44 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 KRASP1-201ENST00000407852 552 ntBASIC18.1■□□□□ 0.49
COL21A1Q96P44 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.1■□□□□ 0.49
COL21A1Q96P44 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COL21A1Q96P44 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL21A1Q96P44 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL21A1Q96P44 YBX1P10-201ENST00000444752 975 ntBASIC18.09■□□□□ 0.49
COL21A1Q96P44 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 RPPH1-201ENST00000516869 333 ntBASIC18.09■□□□□ 0.49
COL21A1Q96P44 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.09■□□□□ 0.49
COL21A1Q96P44 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms