Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 MIR1238-201ENST00000408483 83 ntBASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 AL356652.1-201ENST00000615962 565 ntBASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RPGRIP1Q96KN7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 UNC93B2-201ENST00000285383 730 ntBASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 AL137013.1-201ENST00000432946 1228 ntBASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 AC073195.1-201ENST00000607241 877 ntBASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPGRIP1Q96KN7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 NBPF21P-201ENST00000425093 1451 ntBASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 KRT8P36-201ENST00000489121 1440 ntBASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPGRIP1Q96KN7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 NTF6B-201ENST00000591913 560 ntBASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 AL031963.3-201ENST00000606441 850 ntBASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPGRIP1Q96KN7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.09■□□□□ 0.97
RPGRIP1Q96KN7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms