Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CHMP6Q96FZ7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 KRT19P1-201ENST00000405746 1186 ntBASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP6Q96FZ7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 AC012313.1-201ENST00000593393 3059 ntBASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP6Q96FZ7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP6Q96FZ7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP6Q96FZ7 PRORSD1P-202ENST00000563365 2154 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms