Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 AL390719.1-204ENST00000412397 1219 ntBASIC18.25■□□□□ 0.51
LRRC58Q96CX6 AC073210.2-201ENST00000430369 194 ntBASIC18.25■□□□□ 0.51
LRRC58Q96CX6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.25■□□□□ 0.51
LRRC58Q96CX6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.25■□□□□ 0.51
LRRC58Q96CX6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 FEM1AP3-201ENST00000403722 1741 ntBASIC18.24■□□□□ 0.51
LRRC58Q96CX6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRRC58Q96CX6 KRT8P8-201ENST00000434750 1448 ntBASIC18.23■□□□□ 0.51
LRRC58Q96CX6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC58Q96CX6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 AL162430.1-201ENST00000480705 870 ntBASIC18.22■□□□□ 0.51
LRRC58Q96CX6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 AC005829.2-201ENST00000571422 1056 ntBASIC18.22■□□□□ 0.51
LRRC58Q96CX6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC58Q96CX6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms