Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 AP000692.2-201ENST00000608391 879 ntBASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTHRC1Q96CG8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 AC018445.3-201ENST00000624177 1945 ntBASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 AC026471.5-201ENST00000615068 467 ntBASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 AL049812.1-201ENST00000432563 2267 ntBASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CTHRC1Q96CG8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 FAM207BP-201ENST00000447172 505 ntBASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 DGCR10-201ENST00000609839 495 ntBASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 REXO1L10P-201ENST00000615707 1290 ntBASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 REXO1L12P-201ENST00000622156 912 ntBASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTHRC1Q96CG8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTHRC1Q96CG8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms