Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF34Q969K3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.08■□□□□ 0.81
RNF34Q969K3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.08■□□□□ 0.81
RNF34Q969K3 MIR4497-201ENST00000583208 89 ntBASIC20.08■□□□□ 0.81
RNF34Q969K3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF34Q969K3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
RNF34Q969K3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.08■□□□□ 0.8
RNF34Q969K3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF34Q969K3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RNF34Q969K3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF34Q969K3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF34Q969K3 AC104417.2-201ENST00000562989 1793 ntBASIC20.08■□□□□ 0.8
RNF34Q969K3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF34Q969K3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RNF34Q969K3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF34Q969K3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF34Q969K3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 KRT17P2-201ENST00000300992 1314 ntBASIC20.07■□□□□ 0.8
RNF34Q969K3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
RNF34Q969K3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF34Q969K3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RNF34Q969K3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF34Q969K3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 AC004980.1-204ENST00000429707 299 ntBASIC20.07■□□□□ 0.8
RNF34Q969K3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF34Q969K3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF34Q969K3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RNF34Q969K3 MIR4785-201ENST00000585005 73 ntBASIC20.07■□□□□ 0.8
RNF34Q969K3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 AC026471.5-201ENST00000615068 467 ntBASIC20.07■□□□□ 0.8
RNF34Q969K3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
RNF34Q969K3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RNF34Q969K3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF34Q969K3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF34Q969K3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RNF34Q969K3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF34Q969K3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF34Q969K3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RNF34Q969K3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF34Q969K3 AL596275.1-201ENST00000423464 877 ntBASIC20.06■□□□□ 0.8
RNF34Q969K3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RNF34Q969K3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF34Q969K3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF34Q969K3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
RNF34Q969K3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RNF34Q969K3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF34Q969K3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RNF34Q969K3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF34Q969K3 AC007952.6-201ENST00000573168 2673 ntBASIC20.05■□□□□ 0.8
RNF34Q969K3 AC003957.1-201ENST00000625108 2673 ntBASIC20.05■□□□□ 0.8
RNF34Q969K3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF34Q969K3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RNF34Q969K3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 NUDT16P1-203ENST00000513809 620 ntBASIC20.05■□□□□ 0.8
RNF34Q969K3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.05■□□□□ 0.8
RNF34Q969K3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF34Q969K3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.05■□□□□ 0.8
RNF34Q969K3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNF34Q969K3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNF34Q969K3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RNF34Q969K3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
RNF34Q969K3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF34Q969K3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF34Q969K3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF34Q969K3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF34Q969K3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF34Q969K3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF34Q969K3 AP003071.4-201ENST00000562276 1284 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms