Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 RCC2P6-201ENST00000526625 1557 ntBASIC20.65■□□□□ 0.9
SEMA4DQ92854 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 AL135905.2-201ENST00000584934 1404 ntBASIC20.65■□□□□ 0.9
SEMA4DQ92854 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 MESTP1-201ENST00000404287 994 ntBASIC20.65■□□□□ 0.9
SEMA4DQ92854 AC012618.2-201ENST00000428058 849 ntBASIC20.65■□□□□ 0.9
SEMA4DQ92854 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 AC091390.4-202ENST00000476426 537 ntBASIC20.65■□□□□ 0.9
SEMA4DQ92854 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEMA4DQ92854 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEMA4DQ92854 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SEMA4DQ92854 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEMA4DQ92854 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 AC008550.1-201ENST00000511500 884 ntBASIC20.64■□□□□ 0.89
SEMA4DQ92854 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 AL049637.2-201ENST00000641778 930 ntBASIC20.64■□□□□ 0.89
SEMA4DQ92854 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA4DQ92854 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.64■□□□□ 0.89
SEMA4DQ92854 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 AL031985.4-201ENST00000642138 673 ntBASIC20.63■□□□□ 0.89
SEMA4DQ92854 BX323043.1-201ENST00000641006 1765 ntBASIC20.63■□□□□ 0.89
SEMA4DQ92854 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.63■□□□□ 0.89
SEMA4DQ92854 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA4DQ92854 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.62■□□□□ 0.89
SEMA4DQ92854 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.62■□□□□ 0.89
SEMA4DQ92854 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA4DQ92854 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SEMA4DQ92854 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA4DQ92854 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SEMA4DQ92854 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.62■□□□□ 0.89
SEMA4DQ92854 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA4DQ92854 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SEMA4DQ92854 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms