Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 AL390719.1-204ENST00000412397 1219 ntBASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 AC006333.2-201ENST00000607957 2099 ntBASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RTN4IP1Q8WWV3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RTN4IP1Q8WWV3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RTN4IP1Q8WWV3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RTN4IP1Q8WWV3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 ID1-201ENST00000376105 1233 ntBASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 AL355802.2-201ENST00000402069 882 ntBASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 AC005829.2-201ENST00000571422 1056 ntBASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 AC079598.2-202ENST00000546624 1451 ntBASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RTN4IP1Q8WWV3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 AC009113.1-201ENST00000570267 2443 ntBASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 AC083880.1-201ENST00000608266 535 ntBASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 HLA-B-256ENST00000639848 1089 ntBASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RTN4IP1Q8WWV3 AC141586.3-201ENST00000562166 1838 ntBASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms