Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 AC018553.1-201ENST00000616682 1458 ntBASIC17.3■□□□□ 0.36
SNX33Q8WV41 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SNX33Q8WV41 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 NEFHP1-201ENST00000412845 2629 ntBASIC17.29■□□□□ 0.36
SNX33Q8WV41 AC092368.3-202ENST00000574180 1591 ntBASIC17.29■□□□□ 0.36
SNX33Q8WV41 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 AL138781.2-201ENST00000617896 1843 ntBASIC17.29■□□□□ 0.36
SNX33Q8WV41 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SNX33Q8WV41 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SNX33Q8WV41 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 FAM201B-201ENST00000458407 597 ntBASIC17.28■□□□□ 0.36
SNX33Q8WV41 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 AL161938.1-201ENST00000569833 2180 ntBASIC17.28■□□□□ 0.36
SNX33Q8WV41 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX33Q8WV41 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX33Q8WV41 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SNX33Q8WV41 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SNX33Q8WV41 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 AL390719.1-204ENST00000412397 1219 ntBASIC17.27■□□□□ 0.36
SNX33Q8WV41 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX33Q8WV41 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX33Q8WV41 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX33Q8WV41 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX33Q8WV41 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX33Q8WV41 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.27■□□□□ 0.35
SNX33Q8WV41 OR6D1P-202ENST00000641007 5290 ntBASIC17.27■□□□□ 0.35
SNX33Q8WV41 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX33Q8WV41 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX33Q8WV41 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SNX33Q8WV41 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNX33Q8WV41 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.27■□□□□ 0.35
SNX33Q8WV41 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX33Q8WV41 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX33Q8WV41 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX33Q8WV41 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX33Q8WV41 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms