Protein–RNA interactions for Protein: Q8TDY2

RB1CC1, RB1-inducible coiled-coil protein 1, humanhuman

Predictions only

Length 1,594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1Q8TDY2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 AL031284.1-201ENST00000419297 478 ntBASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 LINC02084-201ENST00000606069 1096 ntBASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC36.81■■■■□ 3.48
RB1CC1Q8TDY2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 PMS2P7-201ENST00000506558 1336 ntBASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC36.8■■■■□ 3.48
RB1CC1Q8TDY2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC36.79■■■■□ 3.48
RB1CC1Q8TDY2 PMS2P2-201ENST00000425039 1128 ntBASIC36.79■■■■□ 3.48
RB1CC1Q8TDY2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC36.79■■■■□ 3.48
RB1CC1Q8TDY2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC36.79■■■■□ 3.48
RB1CC1Q8TDY2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC36.79■■■■□ 3.48
RB1CC1Q8TDY2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC36.79■■■■□ 3.48
RB1CC1Q8TDY2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC36.79■■■■□ 3.48
RB1CC1Q8TDY2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC36.79■■■■□ 3.48
RB1CC1Q8TDY2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
RB1CC1Q8TDY2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 AC018712.1-201ENST00000455767 687 ntBASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 MED22-202ENST00000371999 987 ntTSL 3 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
RB1CC1Q8TDY2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 GRAMD4P1-201ENST00000435181 1110 ntBASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
RB1CC1Q8TDY2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC36.76■■■■□ 3.48
RB1CC1Q8TDY2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
RB1CC1Q8TDY2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC36.76■■■■□ 3.48
RB1CC1Q8TDY2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC36.76■■■■□ 3.48
RB1CC1Q8TDY2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC36.76■■■■□ 3.48
RB1CC1Q8TDY2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC36.76■■■■□ 3.48
RB1CC1Q8TDY2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC36.76■■■■□ 3.47
RB1CC1Q8TDY2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.47
RB1CC1Q8TDY2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 NUS1P2-201ENST00000417358 873 ntBASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 AC005104.2-201ENST00000427818 678 ntBASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 MOK-208ENST00000519058 917 ntTSL 2 BASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 AL592071.1-201ENST00000611956 408 ntBASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 NSUN5P1-202ENST00000421140 1535 ntBASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 NSUN5P2-203ENST00000457352 1529 ntBASIC36.75■■■■□ 3.47
RB1CC1Q8TDY2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 TERC-201ENST00000602385 541 ntBASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 AC148477.8-201ENST00000624298 468 ntBASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 PGAM5P1-201ENST00000518923 814 ntBASIC36.74■■■■□ 3.47
RB1CC1Q8TDY2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC36.74■■■■□ 3.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms