Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 TP73-AS1-207ENST00000624167 988 ntBASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 Z83836.1-201ENST00000624605 1642 ntBASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AL023284.2-201ENST00000405850 579 ntBASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 MIR1233-2-201ENST00000408138 82 ntBASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 MIR1233-1-201ENST00000408722 82 ntBASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AL136038.4-201ENST00000603606 1261 ntBASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 AF238378.1-201ENST00000526806 358 ntBASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ALMS1Q8TCU4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 MIR940-201ENST00000401276 94 ntBASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 AC005332.3-201ENST00000589904 676 ntBASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 AC007225.1-201ENST00000566331 1836 ntBASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ALMS1Q8TCU4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 SMG8-203ENST00000578922 2178 ntBASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 AL031284.1-201ENST00000419297 478 ntBASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 IGHV3-47-201ENST00000425060 335 ntBASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ALMS1Q8TCU4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ALMS1Q8TCU4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms