Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 ZNF815P-204ENST00000434898 1737 ntBASIC14.93□□□□□ -0.02
LINC01006Q8NI28 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 SPDYE15P-201ENST00000424157 909 ntBASIC14.93□□□□□ -0.02
LINC01006Q8NI28 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 AL450487.1-201ENST00000426799 995 ntBASIC14.93□□□□□ -0.02
LINC01006Q8NI28 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.93□□□□□ -0.02
LINC01006Q8NI28 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01006Q8NI28 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 AIRN-201ENST00000601203 4374 ntBASIC14.92□□□□□ -0.02
LINC01006Q8NI28 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01006Q8NI28 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 TSPY21P-201ENST00000433481 731 ntBASIC14.91□□□□□ -0.02
LINC01006Q8NI28 TSPY23P-201ENST00000440136 739 ntBASIC14.91□□□□□ -0.02
LINC01006Q8NI28 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 CLEC4GP1-201ENST00000596555 870 ntBASIC14.91□□□□□ -0.02
LINC01006Q8NI28 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01006Q8NI28 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms